Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13310g00002 ATGGCTCTTTTTCCAGCTATGTTTCTCTTCCCGAACCTACTATTGTTTTTCTCTCAATTTTCTTTTGCGACGGATAGCATCACTCAGTCACAGTCACTTCGCGATGGAAGCACCTTGGTCTCCAACGGTGGAACATTCGAGTTGGGTTTTTTCACTCCCGGTAGTTCGGCAAACCGCTACGTTGGAATCTGGTTCAGAAACATCCCTGTTAAAACAGTAGTTTGGGTTGCCAACCGCGACAACCCTGCCAAAGATAAATCCAGCATGTTGACGCTAAGCAAAGAGGGAAACCTCGTACTGCTCAGCCAAAACCGGTCTGTTATTTGGTCGACAAATGCAACAACACCGGTTTCGAGTCCCGTTGTGCAACTTTTAGACAATGGGAATTTAGTAATAAGAGCCAACGATGACAATAACGAGAATAACAATGATAAAAATTTTCTATGGCAGAGCTTCGACCATCCTTGTGATACTCTCTTGCAAGGAATGAAGTTGGGGTGGAATCTTAAAACTGGTCTGAATCGGTATCTTACTGCATGGAAAAATTGGGATGATCCATCTTCGGGAGATTTTACTTCAGGCGTGAAACTTGGGGTCAATCCTGAATTGGCAATATGGAAGGGCGATGTTGAGTACTACAGGAGTGGTCCTTGGAATGGGATTTTCTCTAGTGGCGTGTTTGGATTCAGTCCTAATCCACTTTTTGAATATAAGTATGTTCAAAACGAAGATGAAGTGTATGTGAGGTACACCCTCAAGAACAATTCCGTGATTTCGATAATTGTTTTGAACCAGACCCTTTATCTTCGCCAACGCATTACGTGGATTCCTCAAACTAGAACTTGGAGCGTGTACCAATCCCTGCCGCAGGACAGTTGTGATGTTTATAATGTTTGTGGCGCGTATGGGAATTGCATGATTAATGCGTCCCCTGTGTGTCAATGCTTGGAGGGGTTCAAGCCAAAATCGTTGCAAGATTGGAATGATATGGATTGGACACAAGGGTGTGTTCGTAGAGAACAATGGAGTTGTGGGGTCAAAAACAGAGATGGTTTTAGAAGATTTGCTGGGATGAAAATGCCAGATACTACACATTCTTGGATAAACACAAGTATGACACTTAAAGATTGCAGGGTCAAATGCTTGGAAAATTGTTCCTGCACGGGTTATGCGAACTTGGACACGAGTGGGGGAGGTAGTGGTTGCTCCATTTGGTTTGGTGATCTTGTTGATTTGAGAGTTTCGGAAAGTGGGCAAGATCTGTATGTTCGAATGGCTATTTTAGATACGGGTGAAGACAATGATGCTAAACAAAAGCATCCAAAAAAGGTCGTCTTGGTGGTCGCAATCGCAATCATTGTTTCGTTAGTCGTTCTGATGCTATTGGCATTCGCCTACATTTACATGACCAAAACAAAGTATAAAGAAAATGGAATATCAACAGAGGAAGAATATGAAGGTGGGCAAGAAGAAAATTTTGAGCTTCCTTTCTTTGATCTTGCTACAATAATTAATGCCACCAATAACTTTTCAATTGACAAAAAGCTTGGTGAAGGTGGTTTTGGACCAGTATACAAGGGTACAATGTTAGATGGACGAGAGATTGCAGTTAAAAGACTTTCAAGGAGTTCAGGACAAGGATTGAAAGAATTTAAGAATGAAGTTATATTGTGTGCCAAACTTCAACATCGAAATCTTGTTAAGGTTCTTGGTTGTTGCGTTGAAGAAGAAGAGAAAATGTTAGTCTATGAATACATGCCCAACAAAAGTCTTGACTCATTTCTTTTTGATTCAATTCAAAGTAAACTTTTAGATTGGCCTATGCGTTTCAACATCTTGTGTGCAATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGAATCATACATAGAGATCTAAAAGCAAGTAATATTTTATTAGACAACAATATGAACCCAAAAATTTCAGATTTTGGGTTGGCTAAAATGTGTGGAGGTGATCAAGTTGAAGGAAATACAACAAGAATTGTTGGAACATACGGTTATATGGCACCTGAATATGCTATTGATGGGTTATTCTCTACAAAATCAGATGTATTTAGCTTTGGTGTATTATTGTTGGAAATTGTCAGTGGGAAGAAAAATAGAACAGTTACATATGAAGACAAAAGTTATAATCTCATTGGACAGTCGTGGAGATTGTGGAAAGAAGGCATTCCGGAACAATTGATTGATGCTAGTTTGGTGGACTCATGCAATATATCTGAAGTTGTACGGTGCATTCAAGTTGGTCTTTTATGTCTACAACATCATCCCGATGATAGGCCAAACATGACATCGGTGATTATAATGTTGAGTAGTGAAAATGTTTTATCTCAACCTAAGGTACCTGGTTTCTTAATTAAAAATATTTCAATTGAAGGTGAGCAATCTTGTGGTAGACAAGAGTCTTGTTCAATCAATGAAGTAACTGTTTCACTATTAAATGCTAGATAG 2484 0.3949 MALFPAMFLFPNLLLFFSQFSFATDSITQSQSLRDGSTLVSNGGTFELGFFTPGSSANRYVGIWFRNIPVKTVVWVANRDNPAKDKSSMLTLSKEGNLVLLSQNRSVIWSTNATTPVSSPVVQLLDNGNLVIRANDDNNENNNDKNFLWQSFDHPCDTLLQGMKLGWNLKTGLNRYLTAWKNWDDPSSGDFTSGVKLGVNPELAIWKGDVEYYRSGPWNGIFSSGVFGFSPNPLFEYKYVQNEDEVYVRYTLKNNSVISIIVLNQTLYLRQRITWIPQTRTWSVYQSLPQDSCDVYNVCGAYGNCMINASPVCQCLEGFKPKSLQDWNDMDWTQGCVRREQWSCGVKNRDGFRRFAGMKMPDTTHSWINTSMTLKDCRVKCLENCSCTGYANLDTSGGGSGCSIWFGDLVDLRVSESGQDLYVRMAILDTGEDNDAKQKHPKKVVLVVAIAIIVSLVVLMLLAFAYIYMTKTKYKENGISTEEEYEGGQEENFELPFFDLATIINATNNFSIDKKLGEGGFGPVYKGTMLDGREIAVKRLSRSSGQGLKEFKNEVILCAKLQHRNLVKVLGCCVEEEEKMLVYEYMPNKSLDSFLFDSIQSKLLDWPMRFNILCAIARGLLYLHQDSRLRIIHRDLKASNILLDNNMNPKISDFGLAKMCGGDQVEGNTTRIVGTYGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGKKNRTVTYEDKSYNLIGQSWRLWKEGIPEQLIDASLVDSCNISEVVRCIQVGLLCLQHHPDDRPNMTSVIIMLSSENVLSQPKVPGFLIKNISIEGEQSCGRQESCSINEVTVSLLNAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13310g00002 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 186 IPR036426 -
Mupr13310g00002 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 152 - -
Mupr13310g00002 827 CDD PAN_AP_plant 343 426 - -
Mupr13310g00002 827 Pfam Domain of unknown function (DUF3403) 783 827 IPR021820 GO:0004674
Mupr13310g00002 827 Gene3D Transferase(Phosphotransferase) domain 1 586 791 - -
Mupr13310g00002 827 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13310g00002 827 SMART serkin_6 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13310g00002 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 789 - -
Mupr13310g00002 827 Pfam PAN-like domain 344 412 IPR003609 -
Mupr13310g00002 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 772 - -
Mupr13310g00002 827 CDD B_lectin 30 155 IPR001480 -
Mupr13310g00002 827 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Mupr13310g00002 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Mupr13310g00002 827 Pfam D-mannose binding lectin 72 181 IPR001480 -
Mupr13310g00002 827 Gene3D Phosphorylase Kinase; domain 1 470 585 - -
Mupr13310g00002 827 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Mupr13310g00002 827 SMART ntp_6 347 425 IPR003609 -
Mupr13310g00002 827 Pfam Protein tyrosine and serine/threonine kinase 511 731 IPR001245 GO:0004672|GO:0006468
Mupr13310g00002 827 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Mupr13310g00002 827 SUPERFAMILY Protein kinase-like (PK-like) 493 786 IPR011009 -
Mupr13310g00002 827 Gene3D - 18 152 IPR036426 -
Mupr13310g00002 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 585 - -
Mupr13310g00002 827 Gene3D Hepatocyte Growth Factor 343 426 - -
Mupr13310g00002 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Mupr13310g00002 827 SMART blect_4 30 155 IPR001480 -
Mupr13310g00002 827 CDD STKc_IRAK 516 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13310g00002 Mupr-Chr13310 8391 11903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13310g00002 445 799 Receptor kinase-like Gene Family AT4G23230 53.911 4.77e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr13310g00002 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13310g00002 - - gmx:100790436 1441.02