Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13310g00001 ATGCATCAAAGTGTGTATTTCCTATACAATTGTATGTTTTTGATCATCAATCAACAGAGAATGACCATTTCACTACCTTTCATGCTTGTCATGATCACAGCCACTTTAATTTTTTTCTCATCCAAAATTTCCTCTGAAACCAACACTATCATCACCCAGTTTCAGTCACTCCCCGATGGAACCACATTGGTTTCCGAAGATGGAACCTTCGAGATGGGTTTCTTCAGCCCAGGTAGTTCTACAAACCGCTACCTAGGAATCTGGTTCAAAAACATCCCAACAAAAACTGTCGTCTGGGTAGCCAACCGCGACCACCCAATCAAGAACAACAACAACTCCAGCAAGTTAACCATAACCAAAGAAGGAAACCTCGTAGTCCTCACCCAAAACAACACCGTTCACTGGTCAACAAACGCAACAAAAAAAGCCTCACGCGCCATCGCGCGTCTCTTGGACTCGGGCAACCTGGTCCTAAGAGACGAGGAAGACGACAATTCTCAAAACTACTTGTGGCAGAGCTTCGACCATCCCTCGGACACGCTTTTACCAGAAATGAAGCTAGGATGGGAAATAACAACAGGTCTCAACAGGTACCTCACTGCTTGGAACAATTGGGAAGACCCATCTTCTGGTCACTTCACTTATGGCTTCACGAGAAGCACTATTCCTGAAAAGCAAATGTGGAATGGGTCATCATTGTTCTTCCGAAACGGCCCTTGGAACGGAATTCGGTTCAGCGGCACGCCCTCGTTGAAGCACCGTCCATTATTCGGTCTTACTTATGAGTACGACGCGAACGAGTGTTATTTCCAATTCTACCCCAAGAACAGGTCGCTAATTTCCCGAATTGTCCTCAACCAAACCCTCTACGCTCTTCAGCGTTTCTTTTGGGACGATGGAAGTCAGAAGTGGAGGTTGTACATGACTGTTCCGGGAGAATATTGCGACGGGTATAACCACTGTGGTCCTTTCGGGTACTGTGCCATGGCGGGTGTGTCCCCAGTGTGCGAGTGTTTGCGTGGATTTGAGCCAAAATCGCCGCAAAATTGGGTTGCTAGGAATTGGAGTCAAGGGTGCGTGCGTAGTGGGAAAACTTGGAGGTGTATGGACAAAAATAAAGATGGCTTCGTATTGTTTAGAAACATGAAGGTTCCGGATCCTAAAACATCTTGGATTAATAGAAACATGACACTCGAGGAATGCAAGGCTAAGTGTTGGAAAAATTGTTCGTGTACGGCTTATGGTAACTCCGATATCACTGGAAAAGGTGGTTGTATCCTCTGGTTTGGCGATCTATTGGACTTGAGACAGCTTCCAAATGCAGGGCAAGATCTGTACGTTAGAGTGGATATCTCCCAAATAGCAAATCAAGATGCAAAAGGTGGTTCTAGGAAAGTGGTGGTTGCGGTGGTCACAAGCATTGTTTCATCTATTATTGCTGTGCTTGTAATTTTCAAGTTGGTTTACTGGAGAAAAACTAAATTTGGAGGCAGAGAGGAAATAGAGATCATGAAGACGAAAGTAAAAGTAAATGATAGCAATCAAGAAGATCTAGAACTACCTTTGTTTGACTTTGATACAATTGCATGTGCCACTAATGACTTCTCAAGTGACAACAAACTTGGTCAAGGTGGTTTTGGTCCTGTATATAAAGGCACATTACCAGACGGACAAGTTATTGCAGTTAAAAGACTTTCTCATACATCTACACAAGGATTAACAGAATTTAAGAATGAGGTTATATTTTGTTCTAAACTTCAACATCGCAATCTTGTTAAAGTTCTTGGCTGTTGTATTGAAGAGCAAGAGAAATTACTCATCTATGAGTACATGCCCAACAAAAGTCTAGACTTCTTTCTTTTTGATTCTTCTCAAAGCAAACTTCTAGATTGGTCTAAGCGATTCAACATTATAAATGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGGATCATACACAGAGATTTAAAAGCAAGTAATATTTTGTTAGATAATGATATGAATCCAAAAATTTCTGATTTTGGGTTAGCTCGAATATGTAGAGGTGATCAAATTGAAGGAAATACAAGTAGAGTTGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTGATGGAATATTCTCCATCAAATCTGATGTATATAGCTTCGAGGTTTTAAGTGGAAAGAAAAACAAAAGGATTTCCTACTCAAATAACAGCTATAATCTTATTGGACATGCATGGAGCTTATGGAAAGAATGCATTCCAAAGGAATTCATTGATACTTGTTTGGAGGACTCCTATGTTATATCTGAAGCCTTGCGATGTATTCAAATCGGTCTTTTATGTGTGCAACATCTACCTAATGATAGACCAAATATGACATCTGTAGTTATAATGTTAACCGGTGAAGGTGATTTGCCACAGCCAAAAGAGCCTGTTTTCTTAGCAGAAAAAGTTTCAATTGAGGAAGATTCTGGGCAACAAATTTGTTATTCAACCAATGAAGTAACTATCTCAAAGTTGGAACCAAGATAA 2538 0.4074 MHQSVYFLYNCMFLIINQQRMTISLPFMLVMITATLIFFSSKISSETNTIITQFQSLPDGTTLVSEDGTFEMGFFSPGSSTNRYLGIWFKNIPTKTVVWVANRDHPIKNNNNSSKLTITKEGNLVVLTQNNTVHWSTNATKKASRAIARLLDSGNLVLRDEEDDNSQNYLWQSFDHPSDTLLPEMKLGWEITTGLNRYLTAWNNWEDPSSGHFTYGFTRSTIPEKQMWNGSSLFFRNGPWNGIRFSGTPSLKHRPLFGLTYEYDANECYFQFYPKNRSLISRIVLNQTLYALQRFFWDDGSQKWRLYMTVPGEYCDGYNHCGPFGYCAMAGVSPVCECLRGFEPKSPQNWVARNWSQGCVRSGKTWRCMDKNKDGFVLFRNMKVPDPKTSWINRNMTLEECKAKCWKNCSCTAYGNSDITGKGGCILWFGDLLDLRQLPNAGQDLYVRVDISQIANQDAKGGSRKVVVAVVTSIVSSIIAVLVIFKLVYWRKTKFGGREEIEIMKTKVKVNDSNQEDLELPLFDFDTIACATNDFSSDNKLGQGGFGPVYKGTLPDGQVIAVKRLSHTSTQGLTEFKNEVIFCSKLQHRNLVKVLGCCIEEQEKLLIYEYMPNKSLDFFLFDSSQSKLLDWSKRFNIINGIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARICRGDQIEGNTSRVVGTYGYMAPEYAIDGIFSIKSDVYSFEVLSGKKNKRISYSNNSYNLIGHAWSLWKECIPKEFIDTCLEDSYVISEALRCIQIGLLCVQHLPNDRPNMTSVVIMLTGEGDLPQPKEPVFLAEKVSIEEDSGQQICYSTNEVTISKLEPR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13310g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 611 809 - -
Mupr13310g00001 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Mupr13310g00001 845 SMART serkin_6 535 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13310g00001 845 Pfam Protein tyrosine and serine/threonine kinase 538 727 IPR001245 GO:0004672|GO:0006468
Mupr13310g00001 845 Pfam PAN-like domain 368 435 IPR003609 -
Mupr13310g00001 845 Gene3D Transferase(Phosphotransferase) domain 1 611 808 - -
Mupr13310g00001 845 SUPERFAMILY Protein kinase-like (PK-like) 520 816 IPR011009 -
Mupr13310g00001 845 SMART ntp_6 371 449 IPR003609 -
Mupr13310g00001 845 CDD STKc_IRAK 541 803 - -
Mupr13310g00001 845 ProSiteProfiles Protein kinase domain profile. 535 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13310g00001 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 33 792 - -
Mupr13310g00001 845 Gene3D Phosphorylase Kinase; domain 1 497 610 - -
Mupr13310g00001 845 Pfam D-mannose binding lectin 96 202 IPR001480 -
Mupr13310g00001 845 PIRSF SRK 18 845 IPR024171 GO:0004674
Mupr13310g00001 845 Pfam Domain of unknown function (DUF3403) 804 845 IPR021820 GO:0004674
Mupr13310g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 43 174 - -
Mupr13310g00001 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 499 610 - -
Mupr13310g00001 845 SMART blect_4 54 177 IPR001480 -
Mupr13310g00001 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 97 208 IPR036426 -
Mupr13310g00001 845 CDD B_lectin 55 177 IPR001480 -
Mupr13310g00001 845 ProSiteProfiles Bulb-type lectin domain profile. 48 171 IPR001480 -
Mupr13310g00001 845 Gene3D - 42 174 IPR036426 -
Mupr13310g00001 845 Pfam S-locus glycoprotein domain 235 346 IPR000858 GO:0048544
Mupr13310g00001 845 CDD PAN_AP_plant 370 449 - -
Mupr13310g00001 845 ProSiteProfiles PAN/Apple domain profile. 368 450 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13310g00001 Mupr-Chr13310 1111 5762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13310g00001 456 816 Receptor kinase-like Gene Family AT4G23190 50.270 2.03e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr13310g00001 PK_Tyr_Ser-Thr 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13310g00001 - - gmx:100792537 1182.55