Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13306g00003 TTAATGGTTGGTTCTGGTGAAGCTCACGTGTCATCATTATTTTTCTTCTCCGTTATGGGCCAGCTTCCTTCACAGGACATTTTAGCATTGCTGGAATTCAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTTAGTTCCTGGAATGAAAAATCTGTTGACATTGATGGATGTCCATCTTCATGGAATGGAGTACTGTGTAACGGTGGTAATGTTGCTGGTGTTTCCCTTGATAACCTTGGTCTCACTGCTTATGCCAACTTGAGTGTTTTCTCAAACCTCACAAAGCTTGTAAAACTCTCTATGTCCAGCAATTCTATCACGGGAAAACTTCCTGACAACATTGCTGAATTCAAGAGCCTTGAGTTTCTGGATGTGTCCAATAATTTTTTTTCTTCATCCTTACCAATGGGAATTGGTAAGTTAACTAGCTTGCAGAATTTGTCATTGGCTGGAAATAACTTCTCTGGCCCAATTCCTGACGCGATTTCAGGTATGGCTTCAATCCAATCTTTGGACTTGAGCTGCAATTCATTTTCTGGACCACTGCCAGCATCATTGACTAAGCTGACTAACCTGGTATTACTTAATTTATCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTTTGAGCTGATTTTTTCTCTTGAAAAGATTGATTTGCATGGGAATATGCTTGATGGTTATTTAGACGAAGAATTTATACATTTTTCAAATGCCAGCTACGTTGATTTTAGTGAGAATATGCTAGTGAGTTCTAATTCTCAGCTTCAAAAGTCTCTACCACAAATATCTGAAAGTATTAAGTATCTGAATCTAAGCCACAACCGGCTTACTGGATCATTGGTTAGTGGAGGCGAGCAACCAGGTTTTGAATACTTGAGGGTGTTAGACCTCAGTTACAATCAATTATCTGGAGAATTTCCTGAATTTGATTTTGTTTATGAACTCACGGTCCTTAAGCTCAGCAACAACAGATTCTCGGGATTTGTTCCCTCTGGTCTTCTTAAAGGAGACTCTTTGGTTTTAACTGAACTAGATTTGAGTGGCAACAATCTCTCAGGACCAGTAAGTATAATTACATCAACAACACTGCACTTTCTTAATCTCTCATCAAATGGTTTCACCGGTGAGCTGCCATTGCTGACTGGAAGCTGTGCTGTACTTGATTTGTCAAATAACAAATTAGAAGGAAACTTAACCAGGATGATGAAATGGGGGAATATTGAATTTCTTGATCTCAGTAGGAATCACTTGACAGGACCCATCCCTGAGGTAACTCCTCAGTTTTTAAGATTAAATTATCTGAATCTTTCCCATAACTTTCTTAGCAAATCCCTCCCTAGAGTCTTAACACAGTATCCAAAGCTTAGAATGCTTGATGTTAGTTCCAACCAGTTAGATGGAAAATTTTTAGTTGATCTGCTCACAGTGCCCACCTTGCAAGAGCTCCATCTTGAAAATAATATGCTCTCAAGCAGCATTAATTTATCATCCTTTTCTCCTCGTCCTTCTGATCTTCAGATTCTTGAACTTTCTTATAACCATTTCAATGGTTCTTTTCCCGCTGAGTTTGGGTCATTAACTGGACTAAAAGTGCTCAATATTGCTGGAAATCATTTTTCTGGTTCTCTTCCAACTACAATTGCTGACATGAGTTCCCTAGATTCCTTGGATATATCAGAAAATCATTTTACAGGCCCTTTACCAATTAACTTGCCAAAGGGGCTAAAAAAATTCAATGCTTCAAACAATGATCTGTCTGGAGTTGTCCCAGAAAACCTTAGGAAGTTCCCTAGATCTTCTTTCTATCCTGGGAATGATTGGTTGCATTTTCCAAATGGTCCTTCTCGATCAACCAATAAACCAGATGAAAATTCCAATAGGAAGCCTATCAGATCTGTTGTTAAAGTGATAATCATAGTGTCATGTGTGGTTGCTGTTCTCTTCATGTTAGTCCTGCTTGCTGTCATCATACACTACATCCGAATATCAAGATCTCAATCAGAACATGCTATTGCTAAGGACATGACTGAGCATGCTCAACCACACACCGCTGGCCCTGATCGCACAAAAGACTCGAGTGGTGCTTTGGTTGTATCAGCTGAGGATCTTATGACCTCACAGAAAGGATCATCATCAGAGATAATCAACCTTGATGAAAAAAGGGCACCTGTAACAGGGTTCTCCCCGTCGAAAAATAGCCACTTTTCATCACCAGGGTCTAGTGATTCAGTTTCTGTAGGAAATCATGCAAGACTATACGCAAGATCACCAGATAAATTGATAGGAGAGCTGTATTTTCTTGATGATGCAATCACTTTGACGCACGAGGAGCTGTCTAGGGCCCCAGCTGAAGTTTTGGGGAGAAGCAGTCATGGTACATCTTACAAGGCAACTCTGGAGAATGGTTTGTTATTGAGAGTGAAGTGGCTAAGAGAAGGAGTGGCAAAACAGAGAAAAGAGTTTGCCAAAGAAGCTAAAAAATTTGCAAACATCAGGCATCCTAATGTTGTGGGATTGAGAGGGTATTACTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTACATCTCTCCAGGAAGTCTTGCAAATCGAGCAGGACGAGAAGGTCCACCATTGACTTGGGCTCTGAGGCTAAAAATATCAGTTGATGTAGCACGTGGGCTGAACTATCTCCACTTTGATCGTGTTGTTCCTCACGGGAACCTTAAAGCAACAAATGTGTTGTTAGATACAGGTGATTTGAATGCACGTGTAGCTGATTACTGTCTGCACAAACTTATGACTCAGGCTGGTACATTTGAACAAATTCTTGATGCCGGGATCTTGGGTTATCGTGCACCAGAGCTTGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAATCAGATGTATATGCTTTCGGGGTCATACTTTTGGAACTTTTAACTGGAAGATGTGCTGGTGATGTTGTATCTGGTGAGAAGGAAGGTTTTGATCTGACAACTTGGGTAAGGTTGCGTGTTTCAGAAGGTAGAAGCTCAGAATGTTTTGATGAAGCATTGGTGCAAGAAATGGGCAATTCAGTTGTTGAAAATGGAATGAATGAAGTCCTTGGAATAGCCATTCGATGCATAAGATCTGTTTCTGAGAGGCCAGGTATCAAGACTGTATATGAAGATCTTTCGTCTATATAG 3189 0.4048 LMVGSGEAHVSSLFFFSVMGQLPSQDILALLEFKKGIKHDPTGYVLSSWNEKSVDIDGCPSSWNGVLCNGGNVAGVSLDNLGLTAYANLSVFSNLTKLVKLSMSSNSITGKLPDNIAEFKSLEFLDVSNNFFSSSLPMGIGKLTSLQNLSLAGNNFSGPIPDAISGMASIQSLDLSCNSFSGPLPASLTKLTNLVLLNLSHNGFTGKIPKGFELIFSLEKIDLHGNMLDGYLDEEFIHFSNASYVDFSENMLVSSNSQLQKSLPQISESIKYLNLSHNRLTGSLVSGGEQPGFEYLRVLDLSYNQLSGEFPEFDFVYELTVLKLSNNRFSGFVPSGLLKGDSLVLTELDLSGNNLSGPVSIITSTTLHFLNLSSNGFTGELPLLTGSCAVLDLSNNKLEGNLTRMMKWGNIEFLDLSRNHLTGPIPEVTPQFLRLNYLNLSHNFLSKSLPRVLTQYPKLRMLDVSSNQLDGKFLVDLLTVPTLQELHLENNMLSSSINLSSFSPRPSDLQILELSYNHFNGSFPAEFGSLTGLKVLNIAGNHFSGSLPTTIADMSSLDSLDISENHFTGPLPINLPKGLKKFNASNNDLSGVVPENLRKFPRSSFYPGNDWLHFPNGPSRSTNKPDENSNRKPIRSVVKVIIIVSCVVAVLFMLVLLAVIIHYIRISRSQSEHAIAKDMTEHAQPHTAGPDRTKDSSGALVVSAEDLMTSQKGSSSEIINLDEKRAPVTGFSPSKNSHFSSPGSSDSVSVGNHARLYARSPDKLIGELYFLDDAITLTHEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLANRAGREGPPLTWALRLKISVDVARGLNYLHFDRVVPHGNLKATNVLLDTGDLNARVADYCLHKLMTQAGTFEQILDAGILGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVVSGEKEGFDLTTWVRLRVSEGRSSECFDEALVQEMGNSVVENGMNEVLGIAIRCIRSVSERPGIKTVYEDLSSI 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13306g00003 1062 SMART LRR_typ_2 316 340 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 143 167 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 480 504 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 554 578 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 191 214 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 432 456 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 530 553 IPR003591 -
Mupr13306g00003 1062 SMART LRR_typ_2 95 119 IPR003591 -
Mupr13306g00003 1062 Pfam Leucine rich repeat 414 469 IPR001611 GO:0005515
Mupr13306g00003 1062 Pfam Leucine rich repeat 145 203 IPR001611 GO:0005515
Mupr13306g00003 1062 Pfam Leucine rich repeat 509 567 IPR001611 GO:0005515
Mupr13306g00003 1062 Pfam Leucine rich repeat N-terminal domain 24 69 IPR013210 -
Mupr13306g00003 1062 SUPERFAMILY L domain-like 270 597 - -
Mupr13306g00003 1062 PANTHER OS07G0626500 PROTEIN 13 1062 - -
Mupr13306g00003 1062 Gene3D Phosphorylase Kinase; domain 1 770 861 - -
Mupr13306g00003 1062 SUPERFAMILY L domain-like 47 382 - -
Mupr13306g00003 1062 ProSiteProfiles Protein kinase domain profile. 784 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13306g00003 1062 FunFam Leucine-rich repeat receptor-like protein kinase 769 861 - -
Mupr13306g00003 1062 Pfam Leucine Rich repeat 345 357 IPR001611 GO:0005515
Mupr13306g00003 1062 Gene3D Ribonuclease Inhibitor 252 623 IPR032675 -
Mupr13306g00003 1062 Gene3D Transferase(Phosphotransferase) domain 1 862 1062 - -
Mupr13306g00003 1062 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 384 620 - -
Mupr13306g00003 1062 Pfam Protein tyrosine and serine/threonine kinase 788 982 IPR001245 GO:0004672|GO:0006468
Mupr13306g00003 1062 MobiDBLite consensus disorder prediction 730 750 - -
Mupr13306g00003 1062 Gene3D Ribonuclease Inhibitor 144 217 IPR032675 -
Mupr13306g00003 1062 Gene3D Ribonuclease Inhibitor 26 143 IPR032675 -
Mupr13306g00003 1062 FunFam Pollen receptor-like kinase 1 864 1062 - -
Mupr13306g00003 1062 SUPERFAMILY Protein kinase-like (PK-like) 787 1059 IPR011009 -
Mupr13306g00003 1062 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 22 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13306g00003 Mupr-Chr13306 21377 25389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13306g00003 12 1010 Receptor kinase-like Gene Family AT4G36180 27.328 4.17e-76 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mupr13306g00003 PK_Tyr_Ser-Thr 4.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13306g00003 - - gmx:100777862 1776.53