Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13303g00001 ATGCTTCACTCGCTCGCACGCTCGCTTACCCCTCACCGGCCGGACCTCGCCCCTTACCCGCCGCCGGACACTTGCCGGTGCCTCAGTTCCCTCTTGACTCGATCCTGCCGGATTCCTCCCCTTCGCCGTCGATCTCGCCGGACCTCCGTGCCGGTCGCCGGGAATTTCGGTGCCAGACGGAGCTCTGAAGATTTCGGCGAGAGAAGACGGATCTGCCGGAGAATTTGTCAATCGCACCGTGATTTCGATCTGGAAGATATGCAGAGGCTTGTTGGAACTAGTGAGGATGATGAAGAAATTGGAATGGACGTGAAAGATGAGGATGACGATGATGATGATTATGAGGAAAATGGAGGCGAACAGGGAAATGCTCTGGGGATGGTGGAGATTGATGGTGGGAATGGGATAGGAACTACCACTGGTGACAACAGGTTTCAGCAGCACCAGCAGTTTCAAGAGCAAGTAGGCACCCCAGGTGGAGGTACTCGGAGATCTAGGCCGCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATCCTGGCAGGGCTTCGCAGGCATGGAAATTATAATCTAAGGGTTAGGGCTGACATAAATGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGTACTACTTTTCCCTCAAGATCACAGGGTCAAAAGCCAGCAGGTGGTAATTCTACAATTGTCACTTCATCATCTTCCCATGCAGCTTCACAACAGACTCCATCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAGTATAATGCATGTCAAACAAAAGGTGTTTTTATGCCAACTCCGTCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGGTGGGGGATGGAGAAGCACAAAGAGACAATCGTCCTCTGATTGGTGGTTCAATGGATAATGTTGACGAGAAGCAGATTGCTGACTTGCCCCCTAGACTACCAGAGCGAGATTTGGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTACCATTAGGGGTAATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAAGGTTTTGAAATCAGTACATGTTGATGGTGTTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCGCAAGAGTATAATTGGAATGGTTATAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGCTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGACACAATCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGAGTTTTAAGAGGTCGAACTGCTGTGGAGGTTTACTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAGTACTTCGAGGATGGCTTAATCTCCATGATTGAAGTTGGACTGGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTACGATCAGTACATGTTGAAAAGCCTTAGGAAAGCAGCAGAAGTAAGGGGTCATGCCATCTGGGCTAGAGGGCCAGATAGTGCTGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGAAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCTTGCGTTACTGCAAAGTTATCGGGTATTTACTGGTGGTACAAGACTGCAAGTCATGCTGCTGAATTAACTGCTGGGTACTATAACCCATGCAATCGTGATGGTTATGCTGCAATTATGGCAATGTTAAAGATAAATGGGGTAAGCTTAAACATTCCTTGTGTTGACTTGCACACGTTGAACCAACATGAGGGCTTTCCAGAGACATTTGCAGATCCTGAGGGATTAGTCTGGCAAGTGTTGAATGCCGGATGGGATGTTGACCTACCAGTTACCAGTCAGAATGCATTTCCTTGCCTGAATAGAGTTAGCTATAACAAGCTTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGCAGGCACTTTTCATCCTTTACTTACCTGAGGCTTAGTCCACTTCTTATGGAACGACAAAACTTCGTAGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTCCAGATTACAGTGCTTGAAACCGTTCAATCACTGGAATGGCGAAGGAAGAAGTTCCTCGGGAACGTTCCTCTGCTTCAGAGGCTTCCTGGCTCGTCTGTACGGAAGATAGCTGAACTTGTGGTTCTCAAACGCTATGAGCCAGGAAAGTATGTTGTTCGTGAAGGGGAACGTGGAGACGGTCTTTACATCATTTGGGACGGAGAGGCTGAGGTTGTTGGCTCTGTTAGTGCTGATGAAGAAAATCATCCAGAGTTTCTATTGAAAAGATATGACTATTTTGGTTTTGCTTTATCAAATGAAGTTCACCATGCTGATGTCGTAGCTTTGACAAAGCTATCATGCCTGGTGCTTCCCCATGAGCACTCAGCATTGCTGCAGCCAAACTCTATCTGGAATGCAGAAAAATCTCTTGATACCTGCTCACCTGTGGAACATATATTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACTCCTCCAGATGCTCCAAAATTTGGGAAGGTATTTGGGGGACAAATAGTTGGACAGGCACTGGCTGCAGCATCAAAAACTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAACATACCCATTATATATCAAGTTAACCGTCTCCGTGATGGGAAGAGTTTTGCTACAAGGAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGCTGGCTTCATTTCAGAAGGAAGAATTAGGGTTTCACCACCAGGCAGTGTCTATCCCATCAGTCCCTGCTCCAGATAAGGCAAGTAACTAA 3159 0.4574 MLHSLARSLTPHRPDLAPYPPPDTCRCLSSLLTRSCRIPPLRRRSRRTSVPVAGNFGARRSSEDFGERRRICRRICQSHRDFDLEDMQRLVGTSEDDEEIGMDVKDEDDDDDDYEENGGEQGNALGMVEIDGGNGIGTTTGDNRFQQHQQFQEQVGTPGGGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQKPAGGNSTIVTSSSSHAASQQTPSASLRGVASGYRSPLEYNACQTKGVFMPTPSPYDLSSSSRSQTSMVGDGEAQRDNRPLIGGSMDNVDEKQIADLPPRLPERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGLISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEVRGHAIWARGPDSAGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLVDHGNRVLSLAKLAFEGSCVTAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMAMLKINGVSLNIPCVDLHTLNQHEGFPETFADPEGLVWQVLNAGWDVDLPVTSQNAFPCLNRVSYNKLLDNAKPMNDPDGRHFSSFTYLRLSPLLMERQNFVEFERFVKRMHGEAVLDLQITVLETVQSLEWRRKKFLGNVPLLQRLPGSSVRKIAELVVLKRYEPGKYVVREGERGDGLYIIWDGEAEVVGSVSADEENHPEFLLKRYDYFGFALSNEVHHADVVALTKLSCLVLPHEHSALLQPNSIWNAEKSLDTCSPVEHILHLEPIEVDIFRGITPPDAPKFGKVFGGQIVGQALAAASKTVDCLKVVHSLHVYFLLVGDFNIPIIYQVNRLRDGKSFATRKVDAIQKGNVIFTLLASFQKEELGFHHQAVSIPSVPAPDKASN 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13303g00001 1052 CDD CAP_ED 806 910 IPR000595 -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 93 178 - -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 289 307 - -
Mupr13303g00001 1052 Pfam Thioesterase-like superfamily 951 1050 - -
Mupr13303g00001 1052 Gene3D Glycosidases 338 800 - -
Mupr13303g00001 1052 PRINTS Plant beta-amylase signature 507 516 IPR001371 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Plant beta-amylase signature 750 764 IPR001371 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Plant beta-amylase signature 765 779 IPR001371 GO:0000272|GO:0016161
Mupr13303g00001 1052 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 922 1031 IPR029069 -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 99 118 - -
Mupr13303g00001 1052 CDD Thioesterase_II_repeat2 937 1029 - -
Mupr13303g00001 1052 ProSiteProfiles cAMP/cGMP binding motif profile. 806 876 IPR000595 -
Mupr13303g00001 1052 Pfam Cyclic nucleotide-binding domain 825 902 IPR000595 -
Mupr13303g00001 1052 Pfam Glycosyl hydrolase family 14 350 770 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 Gene3D - 918 1052 IPR042171 -
Mupr13303g00001 1052 SUPERFAMILY (Trans)glycosidases 343 782 IPR017853 -
Mupr13303g00001 1052 Gene3D Jelly Rolls 801 914 IPR014710 -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 136 159 - -
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 641 652 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 699 721 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 590 609 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 420 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 424 445 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 659 682 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 381 395 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 517 539 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 624 640 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 1 21 - -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 226 263 - -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 164 178 - -
Mupr13303g00001 1052 MobiDBLite consensus disorder prediction 286 321 - -
Mupr13303g00001 1052 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 295 778 IPR001554 GO:0000272|GO:0016161
Mupr13303g00001 1052 SMART cnmp_10 806 923 IPR000595 -
Mupr13303g00001 1052 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 833 849 IPR018488 -
Mupr13303g00001 1052 Pfam BES1/BZR1 plant transcription factor, N-terminal 161 300 IPR008540 -
Mupr13303g00001 1052 SUPERFAMILY cAMP-binding domain-like 798 903 IPR018490 -
Mupr13303g00001 1052 FunFam Acyl-CoA thioesterase II 795 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13303g00001 Mupr-Chr13303 2172 15582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13303g00001 86 790 Glycoside Hydrolase AT2G45880 64.507 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mupr13303g00001 Glyco_hydro_14 9.2e-101 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13303g00001 K01177 - gmx:100805560 1286.55