Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13289g00001 ATGGAGATTGTAGGACTTGGATTCCGTCCCACAGATGAAGAGTTGGTGGACCATTACCTCAAACACAAGTTGCTCCGCGATGATCCCCGTGTCCACGTCATCCATGTCATTGACCTCTGCGATGTGGAACCTTGGGATGTACCAGAATCAGCTATACGATTTGATGGTCCAGAATGGTTCTTCTTCAGTCCTGTTGATTTCAAGTACTCAAATAGTAAAAGGCTTAACAGGACAACCAAGTGTGGCTTCTGGAAAGCCACCGGAAAAGACCGTGATATTAGGAGCAGGGACACCAACAATGTCATTGGGACTAAAAAGACGCTTGTTTTCTATGAAGGCCGTGTTCGCCGTGGTGTCAAGTCCAATTGGGTTATTCACGAATATCATGATGCTACCTTTCCTGAATGCCAGCATTTACTTGATTTTTCTTGCCTTTTTTATTTGTGCGAATTGTATCAAATAATGCTGACTATCCTCCAAAATTTTCAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAACCCGGGAAAACAACTGAAGGGGGGACTGATTCACTGAACTGTGATGAAGGGGAGTCCAACGGACTCATGGCTCCAGACTATGAAAATCAAGCAACAGAAGAAGGAATTCCATGGGCAGAGAAATACTTCTCCCCAATACAACAGTCTCAAACTGGTATTGAGCAAGAAGAAGAATCTTTTCCTAGCTACCCATTTTACAATGCCTATTTTAGAAATGAAAACAACATTACACAGATTCCATTTGAAACTACTACAGAGGATGATGAGTTCCTCAATTCAATTATAGCTGATGAAAAGATAATAATATTGTGGATATTTGTAACCATGAAGCATACCAAGAGAAAAAGGAGAGGATGCTTCGAGATGATTTCTGGGGAGGGGAGACATCCTCTTGTGACTAGACTGCACATAAGTCTTTGGAGATCAATTGTACTGAAATTTCTAGTTCTCCTTCCAATACCAGACAATATGATGGGAACTAAGATCCAAACATCCTCTTGTGACTCGACTTCAGATGAACCTTTGGAGATCAATAGTATTGAAATTTCTCGTTCTCCTTCCACTCTAGCAAGATTGAAAAATCAGTATCATCCAAGACCAGACAACTTCATATTACAAAGAACTGTTGCAGGAAGACCTCGAATACAGAGGAAGGTTTCAAACAATGCAGTATCCCATGTACAGTTGGAAGACAGCACAACTAAACTCAAACTTGATTGCTTTCTTCTCAGCTTGCAAAGAATGGAGAACACAATTTCCAAGGTGCCTTTAGGATTCAGATTCCATCCCACAGATGAAGAGCTTGTGAATTATTACCTAAACCGAAAGTTGCTCAATGTTGATGATCCCCATGTCCAAATCATCCCCGTCATTGACCCTTGCAAAGTGGAACCTTGGGAGATACCAGAAAAATCGTTGATAAAATCCGATGACCCAGAATGGTTTTTCTTCAGTCCGGTGGGTTATAAGTACTCAAATAGTAAAAAGATGAACAGGACAACCAAACGTGGCTTCTGGAAAGTCACTGGAAAAGACCGTATGATTAAGAGCAGAGGCAACAACGTTGTCATTGGGAGTAAGAGGAGTGTTGTTTTCCATGAAGGCCGTGTTCCCGGTGGTGTCAAAACCAATTGGGTTATTCATGAATATCAATCTGCCTCCCATGAAAGCCAGAGGACTTTTGTTTTATGCCGCTTGATGAAGAAAGCTGAGGAAAAAAAGGTTGTGGGAATTGAGCTACCGATTCTATCTGTAGATATTTCTACAAGAACAGATATGGAAATTCCAAACTCTCCATGGTTCGACGATTATATGCCAAATCCATTTGCAGATACTGAGGAGGGTGGCAAATTTTCACTGTGGACTTTTGATGATAACTTCCGTATCAGTGAAGAAAAAATATACTATTGTTCTGTCAACTCCACCCAACCACAGTCATTGAGAAAGGTATACAAGGAAGGCAGTGACACAGATGCTGAAGTTGTCTCCAATCTGGCTCGGAAGGAATTGCCCCGTGTGAAATCAGAAAAAGATCAGAAAGATGCTAGTTCAAGAGAGAACATCGAAACCAGAATCCATGAATCCTCTGATGTCAATATAAAAGATTGTTTCATCTATATGGAGACGATTTCATCAAGCCAAAATCTATTTCCACGCTCGATCTATGTTCCCTCCACACTGGATTTCGTGCCCATAGGAGTTGGATTCCGTCCCACTGAAGATGAGCTTGTGAACTATTACCTCAGACACAAGTTGCTCTGTGATGACCCACGTGTCCACGTCATACCTGACATTGATCTCTGCGATGTGGAACCTTCGCAAATACCAGAGTTATTAGCAAAATCAGCTATACGATTCGATGGCCAAGAATGGTTTTTCTTCAGTCCTGTTGGTTACAAGTACTCAAATAGTAAAAGGTTTAACAGGACAACTCATTGTGGCTTCTGGAAAACCACTGGAGTAGACCGTAGCATTAGAAGCAGGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCTATGAAGGTCGTGTTCCCGATGGTGTCAAGTCCAACTGGGTTATTCATGAATATCATCCTGTTACCTTTGATGAAAGCCAGAAACCTGGGAAAACAACTGAAGGGGGGAGTGATGCACTGATCTGTGATGAAGGGGAGCCCAGTGGACTCATAGTTTCTGACTATGAAAATCAGGCAACAGCTGTAGGAGGTACTTTTACTGGAATGGAAACAACCTTTCAGGCAGAGAAATGCTTCCCCCCAATACAACAGTCTTCCATTGGTATTGATCAGGATGCAGCATCTTTTCTAAACTACCCACTTGCCGGTGCCTATTTTAGAAATGAAAACAACGTTACACAGATTCCATTTGAAACTACTAATGAGGACAATAAAACTACTACTGAGGACGATGAGTTCTTCAATTCACTTTTAGCTTATGATAATTTAGATATTGATGAAGAAAGTATGCATGCTTTTGTCAACAGTTCTACCCCATCAGAGTCGTTGAAAAGGGTATACTGTGAAAGCAGTGATACAGATGCTGAAGTCGTCTCTAAACCGGATGGCGAAATTATAGATATTTCAACAGTACGTTATGAATATCCTAATTCACACCAATACCATGCATCAAAAAGGTTAAAATCATCACATGATGTTGTCCATGGTGGCACATGTCTTCTCTCTTCTATCCATGAAGCAAACCAAGACAAAAAGGACAGTATCTTTCATGATGAATTCTGCGGAGTGGAGACATACTCTTGTGAATCGACTGCAGATAAACCTTTTGAGATCAATTGTATAGAAATTTCTACAATGGGTAGCTTAGCTTCAATGCCTGTGGGATACAGATTCCACCCAAATGATGAAGAGCTTGTGGGTCACTACTTGAACCACAAGTTGCTTGGTAATGACTCCATCGTGCATAATGTCATTGCTCAGATTGATGTTTGCCAGTTTGAGCCTTGGGACTTACCAGCATTTTCCATGATAAAATCGGATGACCAAGAATGGTTATTCTTTAGTCCTCTTGGTTTGAAGTTCAGAAAGGACACAAGGAATAGGTGTAACAGGAAAACCAAAGCTGGCTTCTGGAAGCCAACTGGTAAAGACCGTAGCATTAAGATCAGAGGCACCAACAATGTCATTGGCACCAAGAAGACTCTGGTTTTCTACGAGGGTCGTAGTTCTCATGGTGTCAAGACCAATTGGGTCATTCACGAATATCATGCAGTTACCTTTCCTGATGACAAGAGAGGTTTTGTCTTGTGTCGCTTAATCAACAAAGCTGAGAAAAAAACAGGAAGGGGAACTAATACATTGATACATGATGAAAGGGAGCCAAGTAGCCATGTTGCTGCTGACTTTGAAAATCAAGGAAGAGAGGATAGAATTTCAAATGTATATACTTTGCCAAAAGTGAATTTGGAATCAATCTTCCCAACACCTCCTCGGGCAGAGGAATATGACTCCCCCTCGTTACAGCAGTCTACAATTGTCATTGAAGAGGAACCATCTTCCCAAGCTTTCTCATTTCCCAATCCCTATTTGGGGGAGGAAAACAACATTATGCATATTCCATTGGAAACCATTGAAGAAGAAGACCATCTTGATAATATATATATCGATAAGTTCTTGAATGAAATTTTTGCTGGCGAGGGTGCTTTTATGGGTAAAGAAACAATACCTACCTTTGTTGTAAAAACAATACCTGCTTTGAAGAAGGCATATTATGAAAGCAGAGAAACAGATGGTGAACCACTCTCTGCACTGGCACGGAAGGACACACAATGCATAGGAAAAAAAAAGGTGGGGTGGGAGAGGCTCGAACTCTCGACCTCAGGATTACTCAACCAAGCTATGAGACCTACGCGCTAG 4404 0.413 MEIVGLGFRPTDEELVDHYLKHKLLRDDPRVHVIHVIDLCDVEPWDVPESAIRFDGPEWFFFSPVDFKYSNSKRLNRTTKCGFWKATGKDRDIRSRDTNNVIGTKKTLVFYEGRVRRGVKSNWVIHEYHDATFPECQHLLDFSCLFYLCELYQIMLTILQNFQRTFVLCRLMKKPGKTTEGGTDSLNCDEGESNGLMAPDYENQATEEGIPWAEKYFSPIQQSQTGIEQEEESFPSYPFYNAYFRNENNITQIPFETTTEDDEFLNSIIADEKIIILWIFVTMKHTKRKRRGCFEMISGEGRHPLVTRLHISLWRSIVLKFLVLLPIPDNMMGTKIQTSSCDSTSDEPLEINSIEISRSPSTLARLKNQYHPRPDNFILQRTVAGRPRIQRKVSNNAVSHVQLEDSTTKLKLDCFLLSLQRMENTISKVPLGFRFHPTDEELVNYYLNRKLLNVDDPHVQIIPVIDPCKVEPWEIPEKSLIKSDDPEWFFFSPVGYKYSNSKKMNRTTKRGFWKVTGKDRMIKSRGNNVVIGSKRSVVFHEGRVPGGVKTNWVIHEYQSASHESQRTFVLCRLMKKAEEKKVVGIELPILSVDISTRTDMEIPNSPWFDDYMPNPFADTEEGGKFSLWTFDDNFRISEEKIYYCSVNSTQPQSLRKVYKEGSDTDAEVVSNLARKELPRVKSEKDQKDASSRENIETRIHESSDVNIKDCFIYMETISSSQNLFPRSIYVPSTLDFVPIGVGFRPTEDELVNYYLRHKLLCDDPRVHVIPDIDLCDVEPSQIPELLAKSAIRFDGQEWFFFSPVGYKYSNSKRFNRTTHCGFWKTTGVDRSIRSRDTNTVIGTKKTLVFYEGRVPDGVKSNWVIHEYHPVTFDESQKPGKTTEGGSDALICDEGEPSGLIVSDYENQATAVGGTFTGMETTFQAEKCFPPIQQSSIGIDQDAASFLNYPLAGAYFRNENNVTQIPFETTNEDNKTTTEDDEFFNSLLAYDNLDIDEESMHAFVNSSTPSESLKRVYCESSDTDAEVVSKPDGEIIDISTVRYEYPNSHQYHASKRLKSSHDVVHGGTCLLSSIHEANQDKKDSIFHDEFCGVETYSCESTADKPFEINCIEISTMGSLASMPVGYRFHPNDEELVGHYLNHKLLGNDSIVHNVIAQIDVCQFEPWDLPAFSMIKSDDQEWLFFSPLGLKFRKDTRNRCNRKTKAGFWKPTGKDRSIKIRGTNNVIGTKKTLVFYEGRSSHGVKTNWVIHEYHAVTFPDDKRGFVLCRLINKAEKKTGRGTNTLIHDEREPSSHVAADFENQGREDRISNVYTLPKVNLESIFPTPPRAEEYDSPSLQQSTIVIEEEPSSQAFSFPNPYLGEENNIMHIPLETIEEEDHLDNIYIDKFLNEIFAGEGAFMGKETIPTFVVKTIPALKKAYYESRETDGEPLSALARKDTQCIGKKKVGWERLELSTSGLLNQAMRPTR 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13289g00001 1467 Gene3D NAC domain 11 178 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 Gene3D NAC domain 1130 1276 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 Pfam No apical meristem (NAM) protein 430 558 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 Pfam No apical meristem (NAM) protein 1122 1252 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 Pfam No apical meristem (NAM) protein 5 129 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 Pfam No apical meristem (NAM) protein 738 868 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 SUPERFAMILY NAC domain 4 174 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 SUPERFAMILY NAC domain 735 873 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 Gene3D NAC domain 746 892 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 Gene3D NAC domain 438 581 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 ProSiteProfiles NAC domain profile. 1121 1271 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 ProSiteProfiles NAC domain profile. 737 896 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 SUPERFAMILY NAC domain 427 576 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 SUPERFAMILY NAC domain 1114 1271 IPR036093 GO:0003677|GO:0006355
Mupr13289g00001 1467 ProSiteProfiles NAC domain profile. 429 576 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 ProSiteProfiles NAC domain profile. 2 174 IPR003441 GO:0003677|GO:0006355
Mupr13289g00001 1467 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 428 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13289g00001 Mupr-Chr13289 294 21820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13289g00001 733 873 NAC Transcription Factor Family AT5G24590 44.681 1.80e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr13289g00001 NAM 4.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13289g00001 - - ccaj:109788497 521.161