Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13272g00004 ATGGATTCGTTTTCTCTTGTAGAATTTCAAGCATCTTTTCTTGGTCTTGCACTTGATCCTTCTAAGTGCAGTAAATTGAGCATGGAGGAAAAAAGAGAACTTGTATATGAAGTATCTAAGTGGTCGCATGGTGCATCCGAGATGCTGCAGTCATGGAGCCGGCAAGAGATTTTGCAAATATTGTGTGCAGAGATGGGAAAAGAGAGAAAGTATACTGGGCTGACAAAGTTGAAAATTATAGAAAACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGGGGGCATGAAACTGCTCCAGACCCCGAACCACATTCTTCTCCTGCACCTGGACAGAAACCTGCTAAAAGGCGGAGAAAATCTGAGAATCCTTCTCAGATACCTGTTCCTGTGGCTACTACCAGTGTTTCTGTTAATAATGGTGGTGGTGATTTTGTTAATACTACATACTGCAAAAACTCAGCTTGCAAAGCTACCCTGAATCAAGCAGATGCATTTTGCAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTGATATGTAGTTCTGAGAATCCATTTCCTGGTGTTTCTTGTGGCTTGTCATGCCATCTTGAGTGTGCTTTAAAACATGACGGTTCTGGAATTGGCAAAGATGGTGAGCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTCTCTTGTGGGAAAGTAAATGATTTACTTGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATACTAGACGTGTAGATATACTCTGTTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGAACTGAAGTGTATGAAGAACATTATAAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGCTCACCAGTGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCATCAGGACCTGAGGTTCAGAAACTCTGTGGTTTTGCTCTGGAATCACTTGATTCACTGCTTTCGAAAAGGATCTTGCCTTCCTCACCTAATCCAATAATTCGAGATGCACATTTGCTGGCTCCAAATATGGTGAGGTTTGAAGATGTCACTGCCACATCCCTCACTATTATTTTGGGTTCTGAAGAACCCTCTGGTGAAAATATTGGTGCTTACACCTTGTGGCATCGCAAAGCTGATGACGTGGACTATCCCACGGACCCGACTAGCACCTTGCTCCTACCAAATAGAAGGTTCAGTGTCATGGGTCTAACTCCAGGTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTCGAGGGAGTCAGGTATGTGTGAAGTTCAAATCTCGACAGAGCATGGTGAGGATGAAGTCCCTAATTTCTCAGCAACAGAAAGAAGTCAGAGCCCTGTAACCAACTGTAGCAGCCTTTCCAATCCATCGTCAGTGGAAGATGAAACTAATAACTGTAATCCATATAGTGACCTGACCGACAACCGAGCAGACCATTACCCTTCTTATCACAAGGATAGCGACCAGCTTGCTTCTGGAAATTTAGCTAATCATGCTATTAACTGTTCCAATATAGGCGGCGTAGGACTTCCTCCTGATGCAGATTCTTTGTCAGACAAGCAGCATGCTGGAGGAATGACTGTCTCTATACCTAGTTCTGACGTGCTAAAGCTCGAAAACAAGCGTTCACCGGAGGAACAAGTCACCGAGGACATGAGCACCGATGATGCATTGAACTCGCCAGTTCTAACGGGCAGGGAATGTGTGCTGTTAGTAGGTAGCTCTGAAGGAGCCTTGCCTAATACTCCCTGCAAGTTGGAAATACTCAAGGATGGACCTGGAAGAAATGGAAGATCTAAATCCAGTGGCAAAGAACAAGAAAATGGATCTGGAAAAAGGGAGGGCCCCCAAGATGGAAGTACATCCAAGAAGAGAAGTGGAGAAAGGCAGGATGAGGGGCATGCCGCAAATGGCTTTCCTGATCGAGATTTTGAGTATTATGTGAAAGTGATTAGATGGTTAGAGTGTGAAGGGCACATAGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCCACCTCTCAAGAAGTAAGGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGTATATCCAGCAAGAGAACATCGGTCGTGCCAGCGGGGTTCTGCCTGAAGCTTTGGCATTGA 2241 0.4364 MDSFSLVEFQASFLGLALDPSKCSKLSMEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHETAPDPEPHSSPAPGQKPAKRRRKSENPSQIPVPVATTSVSVNNGGGDFVNTTYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECALKHDGSGIGKDGERPKLDGGFYCVSCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEVYEEHYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGFALESLDSLLSKRILPSSPNPIIRDAHLLAPNMVRFEDVTATSLTIILGSEEPSGENIGAYTLWHRKADDVDYPTDPTSTLLLPNRRFSVMGLTPGTEYSFKVVSNDSRESGMCEVQISTEHGEDEVPNFSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLTDNRADHYPSYHKDSDQLASGNLANHAINCSNIGGVGLPPDADSLSDKQHAGGMTVSIPSSDVLKLENKRSPEEQVTEDMSTDDALNSPVLTGRECVLLVGSSEGALPNTPCKLEILKDGPGRNGRSKSSGKEQENGSGKREGPQDGSTSKKRSGERQDEGHAANGFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATSQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRTSVVPAGFCLKLWH 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 540 554 - -
Mupr13272g00004 746 CDD FN3 355 436 IPR003961 GO:0005515
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 92 134 - -
Mupr13272g00004 746 SUPERFAMILY Fibronectin type III 355 433 IPR036116 GO:0005515
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 531 577 - -
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 449 483 - -
Mupr13272g00004 746 ProSiteProfiles Fibronectin type-III domain profile. 355 450 IPR003961 GO:0005515
Mupr13272g00004 746 Pfam Fibronectin type III domain 355 430 IPR003961 GO:0005515
Mupr13272g00004 746 Pfam PHD - plant homeodomain finger protein 150 269 IPR032881 -
Mupr13272g00004 746 CDD PHD_VIN3_plant 170 235 - -
Mupr13272g00004 746 PANTHER VIN3-LIKE PROTEIN 2-RELATED 16 746 IPR044514 GO:0010048|GO:0040029
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 600 655 - -
Mupr13272g00004 746 Gene3D Immunoglobulins 352 452 IPR013783 -
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 609 655 - -
Mupr13272g00004 746 MobiDBLite consensus disorder prediction 445 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13272g00004 Mupr-Chr13272 11374 16065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13272g00004 9 483 PHD Gene Family AT4G30200 55.666 6.76e-165 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13272g00004 - - gmx:100794721 1369.37