Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13263g00001 GCGAAGAGTGCACAGATTAAGATGGGAAGAGCTCCTTGTTGCTCTAAAGTTGGGTTGCATAGAGGTCCATGGACTCCTCGAGAAGATGCATTACTCACCAAGTATATTCAAGCTCATGGAGAAGGCCAGTGGAGATCACTACCAAAAAGAGCTGGGCTTCTTAGATGCGGAAAAAGTTGCAGACTGAGATGGATGAACTATCTGAGACCAGATATAAAGAGAGGAAACATAACCCCCGAAGAAGATGATCTTATAATTAGAATGCATTCACTTTTAGGAAATAGATGGTCACTCATCGCTGGAAGATTACCAGGACGAACAGATAATGAGATAAAGAACTACTGGAATACCCATCTCAGTAAGAAGTTGAGAAATCAAGGAACAGATCCAAAGACAACGGAGAAAAATAAGGGAAAAAAGAAGAATAATAAGAAAAAGAGCGAGAATAATTATAACAAACTTAAAGGGTCGGAGAAAACATTAGTTTATCTACCAAAACCCATAAGGGTTAAGGCTTTGAGTATACCAAGAACGGATAGCACCTTCACCTTAGATTCCAATTCAGCTAGTGCTTCAACGAGCCAAGAAGCAAAAGAAGTGAACATGGTTTGGGGGGTAGGTAACAATGATGGAATATTTTTTGGTGCAGACCATGACCTAGTCAACGGCGCCTCTTACGTGGAATGTCATTCAGATATTGTTCAAACTCATCATGGTACATTGGAGAAGCTCTATGACGAGTACTTGCAGCTCTTGAAGTTTGAAGAAGAGAAACCTGCAGATGACTTAGATTCTTTTGCTCAATCTTTATTCGTGTAA 819 0.4017 AKSAQIKMGRAPCCSKVGLHRGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLRNQGTDPKTTEKNKGKKKNNKKKSENNYNKLKGSEKTLVYLPKPIRVKALSIPRTDSTFTLDSNSASASTSQEAKEVNMVWGVGNNDGIFFGADHDLVNGASYVECHSDIVQTHHGTLEKLYDEYLQLLKFEEEKPADDLDSFAQSLFV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13263g00001 272 CDD SANT 78 119 IPR001005 -
Mupr13263g00001 272 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Mupr13263g00001 272 SMART sant 20 70 IPR001005 -
Mupr13263g00001 272 SMART sant 73 121 IPR001005 -
Mupr13263g00001 272 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 194 - -
Mupr13263g00001 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Mupr13263g00001 272 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Mupr13263g00001 272 MobiDBLite consensus disorder prediction 118 152 - -
Mupr13263g00001 272 CDD SANT 23 68 IPR001005 -
Mupr13263g00001 272 Gene3D - 21 73 - -
Mupr13263g00001 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Mupr13263g00001 272 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Mupr13263g00001 272 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Mupr13263g00001 272 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Mupr13263g00001 272 Gene3D - 78 153 - -
Mupr13263g00001 272 FunFam MYB transcription factor 75 136 - -
Mupr13263g00001 272 FunFam Myb transcription factor 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13263g00001 Mupr-Chr13263 882 2511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13263g00001 11 132 MYB Transcription Factor Family AT3G13540 74.590 1.68e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr13263g00001 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13263g00001 K09422 - gmx:778044 418.698