Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13245g00002 ATGGCGGCAGGGCGAAAAAGTGTTTCGCTGAGAAGAGACTCTTATAAATATAGTTCCACCAAGGTGTTTGATCACTCTAAGAATGGTTCTTTCCGCGTGGAACTGGGTGGATCTCGCTACCATCACTTTGCCCGTTCCGGAGAGAATGGGTTTCATGGTCGAAAAGAGGAGAGAGAGCAGGGTGAGATCTGTGTTGAAAATGGGGAATACCAGCATGCCTCTGGTTTGCCACCGCCAGAGAAGAAGAGGAAGTTTTCTCCAATCATATGGGACCTGGTAGAGATGAAGGAAGAAAGAATCTCTTCAAAGAGTAGGATCTCGCAGATTGCTGCTGTGTCTACCCCTCCCCCACCTTTACTGAGCAATCCTGGAGCCAATGCTGTTCATTGTGGGGATGTTATGGAGGAGTCTTCCCCAGATTCCTCTTATGTGTTGCCTACAGAACTAAACTGTAAACAAGATGTGGAGGAGGAGAATGTTGTGCAAGGATGGACCATCACAAAGTCAAGATGGGCTTGTGATGGTCCTTCACCAAGTGGTGCTGATAATCACCGCGAGCATGGCAAAGTGAGCTCCAGTCCTGAAATTGGTGAGCTCAATGGTAGTGGATGTTCAGGGAGCACAGTCACTAGATCATCAGGAAGCAGTGGAAGAGATAATTATCTGGGTCCTTTTACTGATGACACCGATTCTGAAAAGGATTTCCTTATGGACTCCATGGACGATGTAGAGGAGCAAAGTAATGTTAGTGATTCTTCATCAGATTCTGATCAGAATGGTGGTTTGATGCATGTACAGAGAAATATAAACATGCTTCAGAGTTGCAGAAGTGTGTGCGAGTTTGAAATGATTAAGAAAATAAATGAAGGCACTTACGGTGTTGTCTATAAAGCTAGGGATAAGAAGACTGGAGAAATAGTTGCATTGAAGAAGGTGAAGATGAACATAGAGAGGGATGGCTTTCCACTATCATCCTTGAGGGAAATAAACATTCTCTTGTCTTTTAATCATCCCTCCATTGTGAATGTTAAAGAAGTAGTTGTAGATGATTTTGATGGTACTTTTATGGTAATGGAGTACATGGAGTATGACCTCAAGGGAATGATGGAGGTTAAAAAGCAGCCCTTTAGCATGAGTGAAATTAAATCCTTGATGCAGCAACTTCTTGAAGGTGTCAAGTATCTCCATGATAATTGGGTTATCCATAGGGACTTGAAGTCATCAAACATTCTGCTGAACCATGATGGGGAGCTTAAAATATGTGACTTTGGGTTGTCAAGGCAGTATGGAAGCCCGCTGAAGCCATATACTCCTGTTGTGGTTACACTATGGTACAGAGCACCTGAACTTTTGTTGGGTGCTGAAGAATACTCAACAGCAATTGACATGTGGTCGGTGGGTTGCATAATGTCTGAATTAATTGCCAAGGAGCCTCTGTTCACGGGTAAAAGTGAACTTGAACAACTTGATAAGATTTTTCGAACCCTGGGTACCCCTGATGAGAAAATTTGGCCAGGATTATCAAAATTACGTGGGGCTAAAGCAAATTTTGTTAAGCAACCGTATAATATGCTAAGGAAGAAGTTTCCAGCTGCATCATTTACTGGTTTGCCAGTTTTATCTGAGCTGGGATTTGATTTGTTGAAGAGGCTTCTAACTTATGACCCTGAAGAGAGGATAACTGCAGAAGCTGCTCTCCGTCATGATTGGTTCCATGAAGCCCCACTTCCCAAATCTGATTTCAAGCCTATTTTTCCTTCTTGGCAAAGCGGCAGATTGATGTATAGACCTGAGAAGGGTTTAGAAGCTTGTGGAGCTGCTGACGGCAGAGCTAGG 1836 0.4346 MAAGRKSVSLRRDSYKYSSTKVFDHSKNGSFRVELGGSRYHHFARSGENGFHGRKEEREQGEICVENGEYQHASGLPPPEKKRKFSPIIWDLVEMKEERISSKSRISQIAAVSTPPPPLLSNPGANAVHCGDVMEESSPDSSYVLPTELNCKQDVEEENVVQGWTITKSRWACDGPSPSGADNHREHGKVSSSPEIGELNGSGCSGSTVTRSSGSSGRDNYLGPFTDDTDSEKDFLMDSMDDVEEQSNVSDSSSDSDQNGGLMHVQRNINMLQSCRSVCEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIERDGFPLSSLREINILLSFNHPSIVNVKEVVVDDFDGTFMVMEYMEYDLKGMMEVKKQPFSMSEIKSLMQQLLEGVKYLHDNWVIHRDLKSSNILLNHDGELKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAEEYSTAIDMWSVGCIMSELIAKEPLFTGKSELEQLDKIFRTLGTPDEKIWPGLSKLRGAKANFVKQPYNMLRKKFPAASFTGLPVLSELGFDLLKRLLTYDPEERITAEAALRHDWFHEAPLPKSDFKPIFPSWQSGRLMYRPEKGLEACGAADGRAR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13245g00002 612 SUPERFAMILY Protein kinase-like (PK-like) 275 576 IPR011009 -
Mupr13245g00002 612 Pfam Protein kinase domain 281 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13245g00002 612 SMART serkin_6 281 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13245g00002 612 Gene3D Transferase(Phosphotransferase) domain 1 363 582 - -
Mupr13245g00002 612 MobiDBLite consensus disorder prediction 242 261 - -
Mupr13245g00002 612 MobiDBLite consensus disorder prediction 170 233 - -
Mupr13245g00002 612 FunFam cyclin-dependent kinase G-2 isoform X1 266 362 - -
Mupr13245g00002 612 FunFam Cyclin-dependent kinase G-2 363 598 - -
Mupr13245g00002 612 ProSiteProfiles Protein kinase domain profile. 281 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr13245g00002 612 MobiDBLite consensus disorder prediction 195 222 - -
Mupr13245g00002 612 CDD STKc_CDC2L1 275 571 IPR045267 GO:0004674|GO:0005524|GO:0006468
Mupr13245g00002 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Mupr13245g00002 612 Gene3D Phosphorylase Kinase; domain 1 264 362 - -
Mupr13245g00002 612 MobiDBLite consensus disorder prediction 246 261 - -
Mupr13245g00002 612 PANTHER CELL DIVISION PROTEIN KINASE 280 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13245g00002 Mupr-Chr13245 5186 8225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13245g00002 276 577 Core Cell Cycle Gene Families AT5G10270 44.340 5.33e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mupr13245g00002 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13245g00002 K08818 - gmx:100788840 924.465