Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13232g00001 ATGACGAAGATAATCAACGGTTCGATGTCAAACTTGTGTACAGAATTGACTCAGGAGCCAGACCTCATCGATAATACCGTCCTCCTAAGTTACCAAACTACCCTTCTCGACAGTACCGGCTCTTCAATTCTGTACCCGCCAATAAATAAATCCTACTTAACAGTAACGGCGATTCCGTCAATACACGGAAACGGAGAAACCTTCAATAGCGTTCACACCCGAAACGCCATTCGCTTCCTCTCTTTCCTCATCCACTATTTCTCCCCGTTTTCTGGCCCGCCGGAAAACCTCTTTCGTTCGCCGGAAAACTGCTTTTGTTTTCGGCGACTTTTCCCCGCGTCTCAGGCGGAAGCCGGTCTCGGTCTTCTTATTGACACCTTCGTATTCGGCGTTTTTCGAGAATGTGGCGAGCCTGGTTGTCCTTCGAGGCTCGCTCTTAATTTGCAACGTTCAGGATCGTGGTTTAGGGTTCGATTTGGATTAGGTGTTGTTGTGATTGATTTTTTTGGCGATTCCTTGTTCCAGTTAACGAAGACGGAGGCCTACAGGGAGCGAACTCGTAATGAAATGGTGGAAAGAAGAGTGACTTTATCTAAGGAAGTTAGGAATGGGTTAGAATTTTTGAAGCGGAAAAGGCTTCAGCGTGCAAAATCTGCCACTACCACCCAGACAAATATTGCTAACATGATGAACAGAAGTGGAGGGGATGCTTTAAGAGCTTCATCATCATGTGGCATGAGATTGCATGGTAATGCTGATGCCTTTTCAAAGCGGAAGGTGGATAAGTTTGATACAAATGACCTGGAATGGACTGATAAAATTCCAGAGTGTCCTGTGTATTCTCCAACAAAAGAAGAGTTTGAGGATCCTTTGATTTATTTGCAAAAGATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCTCCTTTGAGTGCTTCGGTACCTGCTGGGGTAGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACAACTAGAGTACAGCCCCTTCGTCTTGCTGAATGGGATACTGAAGACAAAGTTACATTTTTTATGAGTGGAAGAAATTATACATTTCGCGATTTTGAGAAAATGGCAAACAAGGTATTTGCTCGAAGATATTGCAGTGCTGGATGTCTTCCTGCCACATACTTGGAAAAAGAGTTTTGGCATGAAATTGGCTGTGGAAAGATGCAAACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCTTCTCCCACTGACCAGCTTGGGAACAGCAAATGGAATTTGAAGAAACTTTCAAGGTTGCCCAAATCAATTTTACGTCTTTTGGAAACATCAATTCCGGGAGTAACGGAACCCATGCTGTACATAGGAATGCTGTTTAGTATGTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGCATTAACTATCATCACTGTGGGGCATCAAAAACATGGTACGGTATTCCAGGTCAGGCAGCGTTGGAATTTGAAAGGGTGGTGAGAGAACACGTGTACACTAATGATATTCTGTCAAGTGATGGGGAAGATGGAGCTTTTGATGTTCTCCTGGGGAAAACAACACTATTTCCACCAAATATTTTGTTGGAGCATGAAGTCCCTGTCTACAAGGCTGTTCAAAAGCCAGGGGAGTTTATAATAACCTTCCCTAGAGCATATCATGCTGGCTTCAATCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCAATTGGTGATTGGTTTCCTTTAGGAGCTATTGCCAGCAGAAGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTTCGTACATGCTTGGAACTTGAAGATTCAGACTTTCCCTCGCCAGACTTGTTTTCTCATAAGAGCATTAAGATTTCATTTGTTAACTTGATGCGTTTCCAGCATTGTGCTCGATGGTTCCTAACAAAATCAAGGGCATGTATAAGTGTTTCTTCTCATTCCCATGGCACAATTCTCTGTAGCCTTTGCAAACGTGACTGTTACATAGCTTATGTAGACTGCAACTGTCGCATGCATCCTGTATGCCTACGTCATGATGTTGATTCTCTTGACTTCATCTGTGGGAGCAAACACACACTTTATTTGAGGGAGGATATAATGGATATGGAAGCTGCAGCCAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGACAAGGAAGCAAACTAAAAGTGACCAAAACATGTATGCATATCCTTTGTCAAATATGTTCCAGAGAGCCGAGGCAAATGGATACGCACCTTATTGTGAGCTAAAACTTGATTCTGTTATTGAATTTTATACAACTCCAGAGCACACAACAAATAATCAAGAATACAGTACACAAAATCAATCTGTGTTTGTACATTGCTCTGAAAATCAAAAACCAGTGGTGTCTGAGGTTTCCTTTTCTTCTGCCACATCCACTCTTTGCTCTCTTTCAGAATCTTTTGAGAGCTTGTCTGCTCCCAAAAATGCTGAGGGCCATACTAACATCAATTTAGGTATTATTGATTTTGAAGAGTTTGGAAGCTCGATTAAACCACAGGGTGATATTCAGAGATTTGATACAAAGCCCATTGCGGACGAGAGTGACGATTCTGATTCAGAGATATTTAGGGTAAAGCGCCCTTCATCCCTGAAAGCAGAGAGGAGAAATATGATTGATGCTATGTCTTCGAAGCATACTGAGCAGCAGGGACTTAAAAGACTGAAGAAAATTATTCCGGAAGGAAAGGGTGGGCAACCAATGGGTTTGAGCAGAAGCAGTGAATCAAGTTACAAATACAGTCACCCTGTTAACCATAAAGGCCATGTTGAAATTTCCTCGAGGGACAGATTTGCAAGGGGTAATGACATTCCCGTTTCTGTAAGATATAAGAAGTTGGGCAACGAGGAAATAAGTATGCGACAAGATCACCACCGGAGAGATAGGTTGCAGCAGACTTATAGGGAACCGCCTTCCATTGAGATTGGGCCAAAGCGCCTTAAGGTCCGAGGCCCTTCATTTTTAGGCTTGGAGAGCAGCAGATTGAATTGA 3084 0.4244 MTKIINGSMSNLCTELTQEPDLIDNTVLLSYQTTLLDSTGSSILYPPINKSYLTVTAIPSIHGNGETFNSVHTRNAIRFLSFLIHYFSPFSGPPENLFRSPENCFCFRRLFPASQAEAGLGLLIDTFVFGVFRECGEPGCPSRLALNLQRSGSWFRVRFGLGVVVIDFFGDSLFQLTKTEAYRERTRNEMVERRVTLSKEVRNGLEFLKRKRLQRAKSATTTQTNIANMMNRSGGDALRASSSCGMRLHGNADAFSKRKVDKFDTNDLEWTDKIPECPVYSPTKEEFEDPLIYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPATYLEKEFWHEIGCGKMQTVEYACDVDGSAFSSSPTDQLGNSKWNLKKLSRLPKSILRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGQAALEFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFIITFPRAYHAGFNHGFNCGEAVNFAIGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLLRTCLELEDSDFPSPDLFSHKSIKISFVNLMRFQHCARWFLTKSRACISVSSHSHGTILCSLCKRDCYIAYVDCNCRMHPVCLRHDVDSLDFICGSKHTLYLREDIMDMEAAAKMFEQEDGILDETRKQTKSDQNMYAYPLSNMFQRAEANGYAPYCELKLDSVIEFYTTPEHTTNNQEYSTQNQSVFVHCSENQKPVVSEVSFSSATSTLCSLSESFESLSAPKNAEGHTNINLGIIDFEEFGSSIKPQGDIQRFDTKPIADESDDSDSEIFRVKRPSSLKAERRNMIDAMSSKHTEQQGLKRLKKIIPEGKGGQPMGLSRSSESSYKYSHPVNHKGHVEISSRDRFARGNDIPVSVRYKKLGNEEISMRQDHHRRDRLQQTYREPPSIEIGPKRLKVRGPSFLGLESSRLN 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13232g00001 1027 ProSiteProfiles JmjN domain profile. 277 318 IPR003349 -
Mupr13232g00001 1027 SMART JmjN_1 276 317 IPR003349 -
Mupr13232g00001 1027 Pfam C5HC2 zinc finger 674 725 IPR004198 -
Mupr13232g00001 1027 SUPERFAMILY Clavaminate synthase-like 355 610 - -
Mupr13232g00001 1027 MobiDBLite consensus disorder prediction 983 998 - -
Mupr13232g00001 1027 Gene3D Cupin 270 599 - -
Mupr13232g00001 1027 MobiDBLite consensus disorder prediction 924 947 - -
Mupr13232g00001 1027 PANTHER LYSINE-SPECIFIC DEMETHYLASE 269 922 - -
Mupr13232g00001 1027 Pfam jmjN domain 278 310 IPR003349 -
Mupr13232g00001 1027 FunFam Lysine-specific demethylase isoform A 272 621 - -
Mupr13232g00001 1027 SMART cupin_9 421 594 IPR003347 -
Mupr13232g00001 1027 MobiDBLite consensus disorder prediction 983 1011 - -
Mupr13232g00001 1027 Pfam JmjC domain, hydroxylase 454 577 IPR003347 -
Mupr13232g00001 1027 ProSiteProfiles JmjC domain profile. 424 594 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13232g00001 Mupr-Chr13232 298 7153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13232g00001 274 737 JUMONJI Transcription Factor Family AT2G34880 32.965 1.19e-62 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr13232g00001 JmjC 4.5e-40 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13232g00001 - - gmx:100798611 1528.46