Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13208g00003 ATGACTAACGTCCACCCCCTCACACACTATATATCTAGAAGCATCAACTCCAACACTTTCACTCTCACTCTCTATTATTATCAAAAACTCATCATGGCCGATCACCCACGAGAGGGTGGTGATGAAGCCACTTCTAGAGTGACTATCAAGTGTAAGGGTAAGGGCAAGGGAAAAAAACGTGCAAATTCAGAAGTATCACCACCTCCTTGTGGGGCCTGCAAGTACATGAGGAGGAAGTGCCACGTTCAGTGTGTCTTTGCACCTTACTTTGCGTCTGACCAGGGTTTAGCACGGTTCGCAATAGTGCACAAGATATTTGGTGCAAACAGTGTGTCAAAGATGTTGTCAAATGTTGCACTAGACCGTCGTCATGAAGTAGCGGTTTCCTTATTGTACGAGGCTCAAGCAAGGCTTGCTGATCCTGTTTATGGTTATCTCTCCACCATTGTTTCTTTTCAGCAAAAGGTGGCATCGTTGCAAGGAGAGCTTCTGATGATTCAAAATCAGCTAATAAATACTAGGATTTCATATGCAACTCTTCTTCAAAGCACACAACAACAACAATCAAACATCAATGTAGCTGTGCAGGCAGCACACTCCAACAATTTCCCTGTTTCCACCAACTTGATGAGCTTCTTCAACCCTGGTTTTGATCACCTTGCAATGCAGACAGCATCCTCATCACACAAGCCTCTTCAATTCTCTGCACTTCCCCAAAATGAGGAACAAAGCCAGATTCTCCAAGTTTTCAACAATGACATGGTGCATCTCAGTCCATGA 780 0.441 MTNVHPLTHYISRSINSNTFTLTLYYYQKLIMADHPREGGDEATSRVTIKCKGKGKGKKRANSEVSPPPCGACKYMRRKCHVQCVFAPYFASDQGLARFAIVHKIFGANSVSKMLSNVALDRRHEVAVSLLYEAQARLADPVYGYLSTIVSFQQKVASLQGELLMIQNQLINTRISYATLLQSTQQQQSNINVAVQAAHSNNFPVSTNLMSFFNPGFDHLAMQTASSSHKPLQFSALPQNEEQSQILQVFNNDMVHLSP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13208g00003 259 Pfam Lateral organ boundaries (LOB) domain 69 167 IPR004883 -
Mupr13208g00003 259 ProSiteProfiles LOB domain profile. 68 170 IPR004883 -
Mupr13208g00003 259 PANTHER LOB DOMAIN CONTAINING PROTEIN 68 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13208g00003 Mupr-Chr13208 15776 17788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13208g00003 69 178 AS2 family AT3G03760 61.818 9.76e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr13208g00003 LOB 7.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13208g00003 - - qsa:O6P43_006215 222.246