Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13208g00002 ATGACCAATCAGCCACAAGAGGGTGGTGATGAAGCTAATAAGCGTAACAATAAGAGCATGGACAAAGAGCATGCGAAGTCAGAAGCATCATCAAATCCATGTGGGGCTTGCAAGTACATAAGGAGGAAGTGTCGCACACAATTTACAATAGTACACAAGGTGTTTGGCACGAACAATGTGTCAAAGATGTTGAATGTTGCATTGGATTATCATCATGAAATGGTGGTTTCCTTATTGTATGAGGCTCGGGCAAGGTTGATTGATCTTGTTTATGGTTGTTTCTCCACCATGTTTCTTTTCAACAGCATATATGCACTCTTTACTACTCATAGGCTTTTTTCTATTTTAATATTTTTATTATGGAAAAAACTCAAGCGAAATTATTTAGATTCTTTTATTATTATTGTTAAACGTTGA 417 0.3621 MTNQPQEGGDEANKRNNKSMDKEHAKSEASSNPCGACKYIRRKCRTQFTIVHKVFGTNNVSKMLNVALDYHHEMVVSLLYEARARLIDLVYGCFSTMFLFNSIYALFTTHRLFSILIFLLWKKLKRNYLDSFIIIVKR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13208g00002 138 MobiDBLite consensus disorder prediction 11 28 - -
Mupr13208g00002 138 MobiDBLite consensus disorder prediction 1 33 - -
Mupr13208g00002 138 Pfam Lateral organ boundaries (LOB) domain 46 102 IPR004883 -
Mupr13208g00002 138 PANTHER LOB DOMAIN CONTAINING PROTEIN 30 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13208g00002 Mupr-Chr13208 12012 12486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13208g00002 32 101 AS2 family AT3G03760 44.186 1.08e-19 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr13208g00002 LOB 6.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13208g00002 - - dcr:108218433 82.0333