Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13204g00001 ATGAAGGAAGGTGAGAAGCTATTGGATCCCCAGCTATGGCACGCTTGCGCTGGTGGCATGGTTCAGATGCCTCTGGTTAACTCCAAAGTCTTCTACTTCCCCCAGGGACACGCCGAGCACGCTCACACCACCGTTGATCTGAGGGTTCCGCCGCTCATTCCGTGCACAGTCGCGGCGGTCAAGTTCATGGCCGACCCGGATACCGATGAGGTCTTCGCCAAGCTCAGCCTCGTGCCCGTCGGAAACTCCGAACTCGGCCGCGACACCGACGGTGGTGATGACGTGACTGAGCCCTCCGAGAAACCCGCGTCCTTCGCCAAGACTCTCACGCAGTCCGACGCCAACAACGGAGGCGGCTTCTCCGTGCCGCGGTACTGCGCGGAGACGATTTTCCCGCGGCTGGATTACTCGGCTGAGCCGCCGGTTCAGACCGTGGCGGCGAAGGACGTGCACGGCGAGGTGTGGAAGTTCCGGCACATTTACCGAGGCACGCCGCGGCGGCACTTGCTGACGACCGGGTGGAGCAGTTTCGTGAACCAGAAGAAACTGGTGGCTGGTGATGCTGTTGTGTTTCTGAGGGCCGAGAATGGAGACTTGTGTGTTGGGATTCGGAGGGCAAAAAAGGGAATTGGTGGTTGTGAGGCCTCATCTGTTTGGAACTCTGCTTCTGGGTCTGGGAATTGTGGAATTGGGCCTTATGGGCCTTTCTCTTTTTTCTTGAGAGAGGAGAATAAACAACATTTGAGGAGTGGGAGTGGGAGTTCACAGGTTCCAAGGGTGAGAGTGAGGCCTGAATCTGTTACTGAAGCTGTAACATTGGCTGCTAGTAATAAGCCATTTGAGGTTGTTTATTACCCTAGAGCTAGCACTCCTGAGTTTTGCATTAAGGTTTCTTCTGTTAGAGGGGCTATGAGGATTCAGTGGTGTTCTGGTATGAGATTCAAGATGGCCTTTGAAACTGAGGACTCTTCCAGGATTAGCTGGTTCATGGGAACCATTGCTTCTGTTCAGGTTGTTGACCCCATCCGCTGGCCCAATTCCCCATGGAGGCTTCTTCAGGTTACTTGGGATGAGCCAGATTTACTGCAAAATGTGAAGCGTGTTAGCCCGTGGTTGGTTGAATTGGTATCAAGCATGCCAGTCATCAATTTCACACCCTTCTCTCCACCAAGGAAGAAGCCGAGGTTTCCACAACACCCGGATTTCCCCCTTGATGTTCAATTTCCGATACCAACGTTTTCAGGCAACCAGCTTGGGCCTAACAGCCCCTTGTGTGGTTTTTCGGATAATGCCCCTGCAAGCATACAGGGAGCCAGGCATGCTCAAATTGGAATATCTCTATCAGATCTCGACCTTAACAATAAACTGCAGTTGGGGTTGCTTCCAACTAATATCCAACAACTTGAAGTGTTTAGTGGGATTTCAAATGGTAACATGACCAACCATGATAAGAGCAAAGAAAGCTTATCATGCTTGCTCACCATGGGGAAATCTAGTAAGAGTTTGGAGAAATCTGATGATGTTAAGAAACACCAGTTTTTGCTTTTTGGTCAACCAATTCTCACCGAGCAACAAATTTCTAGAAGCTGTTCTACAGATGTGTTGTCTCGTGGAAAAAATTCACTCAATGATGATAAGGACAAAGAGAAGTGTGTTTTGGATGACTCCCAATCTGCACTCTCACAGCAGTTTTCACCAGGAAAATCTTCTGCTGATGAGTTTTCTTGGCAACTTGGCTTGGATACTGGTCATTGCAAGGTTTTCTTGGAGTCAGAAGATGTAGGGAGGACCCTAGACCTATCACATCTTGGTTCTTATGAAGAGCTGTATAGGAGACTTGGCAACATGTTTGGCATAGAAAGATCTGAGATTTTTAATCGTGTGCTCTACCGTGATGCAACAGGTTCTGTTAAGCAAACTGGAGAAGAACCCTTCAGTGATTTCATGAAGACAGCAAAAAGATTGACAATTCTGACGGATTCAGGCAGCAAAAATATTAAAAGGGTCTGGATTACAGGAACTCGTAATGGTGAACATGGATTGGATGCATCAAACAAAACAGGCCCTCTGAGCATATTTGCTTAA 2085 0.4892 MKEGEKLLDPQLWHACAGGMVQMPLVNSKVFYFPQGHAEHAHTTVDLRVPPLIPCTVAAVKFMADPDTDEVFAKLSLVPVGNSELGRDTDGGDDVTEPSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVAAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDAVVFLRAENGDLCVGIRRAKKGIGGCEASSVWNSASGSGNCGIGPYGPFSFFLREENKQHLRSGSGSSQVPRVRVRPESVTEAVTLAASNKPFEVVYYPRASTPEFCIKVSSVRGAMRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPVINFTPFSPPRKKPRFPQHPDFPLDVQFPIPTFSGNQLGPNSPLCGFSDNAPASIQGARHAQIGISLSDLDLNNKLQLGLLPTNIQQLEVFSGISNGNMTNHDKSKESLSCLLTMGKSSKSLEKSDDVKKHQFLLFGQPILTEQQISRSCSTDVLSRGKNSLNDDKDKEKCVLDDSQSALSQQFSPGKSSADEFSWQLGLDTGHCKVFLESEDVGRTLDLSHLGSYEELYRRLGNMFGIERSEIFNRVLYRDATGSVKQTGEEPFSDFMKTAKRLTILTDSGSKNIKRVWITGTRNGEHGLDASNKTGPLSIFA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13204g00001 694 Pfam B3 DNA binding domain 105 206 IPR003340 GO:0003677
Mupr13204g00001 694 SMART B3_2 105 207 IPR003340 GO:0003677
Mupr13204g00001 694 CDD B3_DNA 104 205 IPR003340 GO:0003677
Mupr13204g00001 694 ProSiteProfiles PB1 domain profile. 582 674 IPR000270 GO:0005515
Mupr13204g00001 694 FunFam Auxin response factor 308 381 - -
Mupr13204g00001 694 SUPERFAMILY DNA-binding pseudobarrel domain 99 211 IPR015300 -
Mupr13204g00001 694 FunFam Auxin response factor 103 207 - -
Mupr13204g00001 694 Gene3D - 103 207 IPR015300 -
Mupr13204g00001 694 ProSiteProfiles B3 DNA-binding domain profile. 105 207 IPR003340 GO:0003677
Mupr13204g00001 694 Pfam Auxin response factor 270 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr13204g00001 694 Gene3D - 308 381 - -
Mupr13204g00001 694 MobiDBLite consensus disorder prediction 83 102 - -
Mupr13204g00001 694 Gene3D - 581 667 - -
Mupr13204g00001 694 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 664 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13204g00001 Mupr-Chr13204 1828 4621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13204g00001 1 666 B3 DNA Binding Superfamily AT4G30080 58.455 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr13204g00001 B3 1e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13204g00001 - - gmx:100814686 1178.31