Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13203g00001 ATGAAGAGACTAAGAGAAGTCAAAGAAGTGGCACAAAACATGATGAATCCCCAAAATAGTCCATCGGAAGAATTATGTTTTGAGTGCAAGAGCTGCGAGTCCAAGTTCGCATTGGATGGACACAACACTAACCGCAAGAAGCCAAAACTTAAGGATGGGAATGGGAATGGGAAACAACATGCAAAAATACATGAGTGCTCAATTTGTGGTGAAACATTCTCTCGGGGACGGGCTTTGGGAGGTCATATGAGAAAACACAAAGATCGACTCTTAAAGAGATCCAATAATACTAGTCAAAATATTATGTTCTACGACCTCAACTTGACTCCTTTGCAGAATGACTTGAAGTTATTGTTCGGGATCACAAACCCACCGAAACTTTATATTTCTTAA 393 0.3995 MKRLREVKEVAQNMMNPQNSPSEELCFECKSCESKFALDGHNTNRKKPKLKDGNGNGKQHAKIHECSICGETFSRGRALGGHMRKHKDRLLKRSNNTSQNIMFYDLNLTPLQNDLKLLFGITNPPKLYIS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13203g00001 130 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 86 IPR013087 -
Mupr13203g00001 130 SUPERFAMILY beta-beta-alpha zinc fingers 61 88 IPR036236 -
Mupr13203g00001 130 MobiDBLite consensus disorder prediction 38 60 - -
Mupr13203g00001 130 Gene3D Classic Zinc Finger 40 107 - -
Mupr13203g00001 130 Pfam C2H2-type zinc finger 64 88 - -
Mupr13203g00001 130 MobiDBLite consensus disorder prediction 39 59 - -
Mupr13203g00001 130 PANTHER ZINC FINGER PROTEIN ZAT5 18 112 - -
Mupr13203g00001 130 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mupr13203g00001 130 SMART c2h2final6 64 86 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13203g00001 Mupr-Chr13203 7809 8201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13203g00001 7 127 C2H2 Transcription Factor Family AT2G37430 38.095 1.19e-22 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr13203g00001 zf-C2H2_6 5.2e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13203g00001 - - gmx:100800759 115.931