Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13190g00004 ATGTATGGTCCCCATGGAATTAATGTTTTCAGCTCAACAAATGAACATTGTTTGCCGGCCAAGGAGTTGGAACTCTGGTACGTGTATAAAAAACCAAAGTTCATTAGTCCTATATCGAAGTCAGGCTGTGGAGCAGCTCTTGTAAACGAGAAGCTGTCACTTACAATAGTAGGCATAACAATTGTTTCGGGTCTTGCTCTCACGGTGGCTACGTATTCTGTTGGTCATGTCTCTGGTGGCCATTTCAATCCTGCAGTCACAATTGCCTCAAAGTGTTGTATCATGACAAGGTGGATATTGGAGTAA 306 0.4281 MYGPHGINVFSSTNEHCLPAKELELWYVYKKPKFISPISKSGCGAALVNEKLSLTIVGITIVSGLALTVATYSVGHVSGGHFNPAVTIASKCCIMTRWILE 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13190g00004 101 Gene3D Glycerol uptake facilitator protein. 39 99 IPR023271 -
Mupr13190g00004 101 PANTHER AQUAPORIN NIP2-1 42 98 IPR034294 -
Mupr13190g00004 101 Pfam Major intrinsic protein 51 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13190g00004 101 SUPERFAMILY Aquaporin-like 42 91 IPR023271 -
Mupr13190g00004 101 ProSitePatterns MIP family signature. 81 89 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13190g00004 Mupr-Chr13190 28111 29064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13190g00004 41 93 Major Intrinsic Protein MIP AT4G18910 52.727 4.78e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13190g00004 K09874 - gmx:100798380 90.1225