Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13184g00001 ATGGTAGAGCAAGAAACAGAGACGACAAGAAACACCAACGCCACTTCACCCTCTTCCTCCTCGTCACCATCCACTTCTAAGAAACGAGGCAGAGACAACATCAACAATAACAAGCATTCTGTCTACAGAGGTGTCCGAATGCGCACGTGGGGAAAATGGGTGTCGGAAATCCGCGAGCCGCGAAAGAAGAACCGAATCTGGCTCGGCACCTTCGCTACCGCCGAGATGGCCGCGCGTGCTCACGACGTGGCGGCGCTCACCATAAAGGGCTCCTCCGCCATCCTCAACTTCCCCGAACTCGCCGCCTCGCTGCCCCGACCCGCCTCCAACTCCCCCCGCGACGTGCAGGAAGCCGCCGCCAAGGCCGCCTCCATGGAGGCTCCGCCGCGAACCCCTTCCTCTCCGGCCGCCACGCCGGAGGACCTTGGCGAGATCGTGGAGCTGCCGACGCTCGGCACCAGCTTCGACTCGCCCGACCCGAATACCGAGTTCGTGTTTCTCGACCCGAATGACGCGTGGCCCTATTCTCACCCGTGGTATCACGGCATTTATGACGGTGGCTACTTCATTGGTGACATGAACATGAATTGCATACTCATTCTTCCTCTTTTTATTGATGATGAAGCTTCGAATAGAAATTCGACTCATGGTACATACAATACAGCTAGCAATGAGTGA 678 0.5708 MVEQETETTRNTNATSPSSSSSPSTSKKRGRDNINNNKHSVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALTIKGSSAILNFPELAASLPRPASNSPRDVQEAAAKAASMEAPPRTPSSPAATPEDLGEIVELPTLGTSFDSPDPNTEFVFLDPNDAWPYSHPWYHGIYDGGYFIGDMNMNCILILPLFIDDEASNRNSTHGTYNTASNE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13184g00001 225 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Mupr13184g00001 225 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Mupr13184g00001 225 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 153 - -
Mupr13184g00001 225 FunFam Ethylene-responsive transcription factor 2 40 99 - -
Mupr13184g00001 225 Pfam AP2 domain 40 90 IPR001471 GO:0003700|GO:0006355
Mupr13184g00001 225 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Mupr13184g00001 225 SUPERFAMILY DNA-binding domain 40 99 IPR016177 GO:0003677
Mupr13184g00001 225 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Mupr13184g00001 225 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Mupr13184g00001 225 MobiDBLite consensus disorder prediction 105 140 - -
Mupr13184g00001 225 CDD AP2 40 100 IPR001471 GO:0003700|GO:0006355
Mupr13184g00001 225 MobiDBLite consensus disorder prediction 1 30 - -
Mupr13184g00001 225 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13184g00001 Mupr-Chr13184 20975 22506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13184g00001 11 179 AP2-EREBP Transcription Factor Family AT5G11590 53.886 2.97e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr13184g00001 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13184g00001 K09286 - gmx:100804801 305.064