Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13183g00001 ATGGCGAAAGACGTTGAGCAGGTGACAGAGCAAGGTGAGTACTCGGCGAAGGACTACCACGACCCCCCTCCGGCGGCTTTGTTCGACCCCGATGAGTTGACAAAGTGGTCGTTGTACAGAGCCGCCATAGCCGAGTTCATCGCAACCCTCCTCTTCCTTTACATCACCGTCTTGACCATCATTGGCTACAAGAGACAGAGTGATATCACTATCAAAGGTAACACCGAATGTGACGGCGTCGGCATTTTGGGCATAGCTTGGGCCTTCGGTGGCATGATCTTCATCCTCGTTTACTGCACCGCCGGCATCTCTGGGGGACACATAAACCCTGCGGTGACATTCGGGTTGTTCCTGGGACGCAAGGTGTCTTTGGTAAGGGCGTTGCTGTACATGGTAGCACAGTGCGCCGGTGCAATCTGCGGTGCTGGGTTGGCGAAGGGCTTCCAAAAATCGTTCTACAACAGGTATGGAGGTGGGGTTAACCTTATCAGCGATGGTTACAACAAAGGTACCGCTTTGGGTGCTGAGATCATTGGTACCTTCGTTCTTGTCTACACCGTTTTCTCCGCCACTGATCCTAAGAGGAACGCTAGGGACTCTCATGTTCCTGTATTAGCACCCCTTCCCATTGGATTTGCCGTGTTCATGGTTCACTTGGCTACAATCCCTGTCACCGGAACCGGCATTAACCCGGCAAGAAGTTTCGGACCGGCTGTGATCTTCAACAAGGACAAAGCCTGGGACGACCAATGGATTTACTGGGTTGGGCCGTTTGTTGGAGCTGCGGCGGCTGCATTCTACCATCAATACATTCTTAGAGCAGCAGCAATAAAAGCTCTTGGATCGTTCAGGAGCAACGCTTAA 864 0.5243 MAKDVEQVTEQGEYSAKDYHDPPPAALFDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDITIKGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMVAQCAGAICGAGLAKGFQKSFYNRYGGGVNLISDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNKDKAWDDQWIYWVGPFVGAAAAAFYHQYILRAAAIKALGSFRSNA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13183g00001 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Mupr13183g00001 287 Pfam Major intrinsic protein 32 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 NCBIfam MIP family channel protein 44 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 CDD MIP 40 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr13183g00001 287 SUPERFAMILY Aquaporin-like 32 273 IPR023271 -
Mupr13183g00001 287 FunFam Probable aquaporin PIP1-2 25 287 - -
Mupr13183g00001 287 Gene3D Glycerol uptake facilitator protein. 25 287 IPR023271 -
Mupr13183g00001 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 276 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13183g00001 Mupr-Chr13183 2190 3704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13183g00001 1 287 Major Intrinsic Protein MIP AT2G37170 79.094 7.67e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13183g00001 K09872 - gmx:732604 546.584