Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1317g00009 ATGGGTAGTAGGGACAGCCAACCAAAGTCCAAATCTAGGACAGTGCAACCCTTTTTAAAAAACATGGAGTCTAGCAATTTTCATGGTGACAAAAGGGCAGAGAAAAAGATAATAAGATACAAGGAATGTCTGAAGAACCATGCAGCTGCAATTGGTGGCAATGCAACTGATGGGTGTGGTGAGTTCATGGCTGCTGGAGAAGAAGGCACCCCTGAGGCTCTCATGTGCTCAGCTTGCAATTGCCACAGAAACTTCCACAGAAAAGAGATAGATCAGTCGTCTGATTCTAATTCCACTCCTCTGATGATTATTCCTGACACTACTCAGATAAGGCACGTTTTGGCTCATTTGTCTCCTAACAAAAGTGGCTCAATTAGTCCTTCTGATATGTCTGATGAGAAGGACTATGAAGATGGGGTGGTTAAGGAGGTGGGAAATTCAACTGAAAAGGTGAAGAAGAGGTTCAGAACCAAGTTCACACAAGAACAGAAGGAGAAGATGCTGGGTTTTGCAGAAAGGGCAGGGTGGAGGATACAGAAGCTAGAGGAATCTGTGGTGCAAAAGTTTTGCCAAGAGATTGGAATCAAAAGAACAGTCCTCAAAGTGTGGATGCACAATAACAAGAACACTTTTGCCAAGAGAAATCCCTCCACTAGCTAG 660 0.4379 MGSRDSQPKSKSRTVQPFLKNMESSNFHGDKRAEKKIIRYKECLKNHAAAIGGNATDGCGEFMAAGEEGTPEALMCSACNCHRNFHRKEIDQSSDSNSTPLMIIPDTTQIRHVLAHLSPNKSGSISPSDMSDEKDYEDGVVKEVGNSTEKVKKRFRTKFTQEQKEKMLGFAERAGWRIQKLEESVVQKFCQEIGIKRTVLKVWMHNNKNTFAKRNPSTS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1317g00009 219 Pfam ZF-HD protein dimerisation region 38 90 IPR006456 -
Mupr1317g00009 219 Gene3D - 140 213 - -
Mupr1317g00009 219 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 39 90 IPR006456 -
Mupr1317g00009 219 SUPERFAMILY Homeodomain-like 146 213 IPR009057 -
Mupr1317g00009 219 FunFam Zinc-finger homeodomain protein 2 140 213 - -
Mupr1317g00009 219 NCBIfam homeobox domain, ZF-HD class 152 209 IPR006455 -
Mupr1317g00009 219 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 40 89 IPR006456 -
Mupr1317g00009 219 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1317g00009 Mupr-Chr1317 61437 62761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1317g00009 34 215 ZF-HD Transcription Factor Family AT1G14440 53.535 9.14e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr1317g00009 ZF-HD_dimer 4.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1317g00009 - - gmx:100793926 342.813