Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1317g00001 TTGGCAAAAGAGGTTGAGGAGTTTGAACCTTGTATATCTAATGCTGCAGATATTAAGTTAGTTACTTGGTCAAAGTTTTCTGGCATCTCTGTCTTGACAATGAGACTTCAGTTTGAGAATTCTTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCTTATTGTTTGGTTGCTATTGGAGGTTCCGAAATCTTCTACAGTGCATTTGAGACAGAGTTAACAGATGCTATCCCTGTGATCAAGACCTCCATCAGTGGCACTCGTATTGTTGGTCGTCTTTGTGTTGGTAAAGTTTTTTCCCTTAGTTTCTTAAATCTTAAAGAGTATCAGTCCTTGCCTTGGATTATAAACCAATCTAGAATTAACTTACCTTTTTATTGGTTTGCAGGAAACAAGAATGGGCTTCTCTTGCCCCGTACCACCACGGACCAAGAGCTTCAACACTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGATTATCCGCTCTGGGAAATTGTATAGTATGTAATGATCATGTGGCCCTCACACACGCTGATCTTGACAAGGAAACAGAGGAGAAGATTGAAGATGTTCTTGGAGTAGAAGTTTTCAGTCAGACTATTGCGGGTAATATTCTTGTTGGCAGTTATTGTGCGCTCTCCAATAGAGGTGGTTTGGTCCACCCTCATACTTCCATTGAAGACTTGAATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTTGCCGGGACTGTAAATCGTGGTAGTGAACTAATAGCGGCCGGCGTGACAGTAAACGATTGGACAACATTTTGTGGTTCAGACACCACAGTAGCAGAGCTCTCTGTCATGGACAGTGTTTTCAAGTTCAGAGAAATCCAACCTAGTGCCATTGTGGATGAGATGAGGAAATCGCTAGTTGATATTTATGTCTAA 933 0.4105 LAKEVEEFEPCISNAADIKLVTWSKFSGISVLTMRLQFENSCEVGVFSKLTNAYCLVAIGGSEIFYSAFETELTDAIPVIKTSISGTRIVGRLCVGKVFSLSFLNLKEYQSLPWIINQSRINLPFYWFAGNKNGLLLPRTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIVCNDHVALTHADLDKETEEKIEDVLGVEVFSQTIAGNILVGSYCALSNRGGLVHPHTSIEDLNELSTLLQVPLVAGTVNRGSELIAAGVTVNDWTTFCGSDTTVAELSVMDSVFKFREIQPSAIVDEMRKSLVDIYV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1317g00001 310 Hamap Translation initiation factor 6 [eif6]. 21 310 IPR002769 GO:0042256|GO:0043022
Mupr1317g00001 310 Gene3D - 30 119 - -
Mupr1317g00001 310 Pfam eIF-6 family 35 97 IPR002769 GO:0042256|GO:0043022
Mupr1317g00001 310 Pfam eIF-6 family 128 268 IPR002769 GO:0042256|GO:0043022
Mupr1317g00001 310 SUPERFAMILY Pentein 127 289 - -
Mupr1317g00001 310 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 129 309 IPR002769 GO:0042256|GO:0043022
Mupr1317g00001 310 SMART eIF6neu2 34 269 IPR002769 GO:0042256|GO:0043022
Mupr1317g00001 310 SUPERFAMILY Pentein 33 98 - -
Mupr1317g00001 310 Gene3D - 120 289 - -
Mupr1317g00001 310 NCBIfam translation initiation factor IF-6 129 288 IPR002769 GO:0042256|GO:0043022
Mupr1317g00001 310 CDD IF6 35 288 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1317g00001 Mupr-Chr1317 1557 5048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1317g00001 32 310 Eukaryotic Initiation Factors Gene Family AT3G55620 74.194 1.05e-151 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1317g00001 K03264 - jre:108979950 417.927