Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13178g00002 ATGAGAGAAGATCGTGCCGTTGAAGGTGCACTTCCAGCAAAACATCATGATGTTGGATACAATAAAAAGAAATTTTTTAAGAACCAGCCAACAAGCAGCAAGAATACAACAAACAACCAAAACAAAGGCAAGGGTAAAAAGAAAAGTTACCCACCTTGTCAGTATTGCGGAAAAATGGGTCATCCTCCATTCAGATGTTGGAGGAGACCTGACGCGAAGTGTAGTAGTAGTTCAAGTGAATCGTGGTTGATAGATAGCTGCTACACCAACCACATGACCTATGACAGAGAATTATTCAAGTGTTTGAACAACACCGAAGTCAAATGGGTCAGAATCGGGAATGGTGAACAAATTCCATGTTTGGTTCAAGGTCTCCCCTGTCTTGAATCTAAAATTCCAGACTGTAGAGCTTGTCAACAAGGAAAGCAATCAAGACTTCCACTCAAGCAATCAACTTGGAGAGCTACTGAGAAGCTGCAATTGATACACGTGGCTAGACCTCACAACAATCCATCTCTCAATGGTAGCAGTTATGATGATAGCCTCACTCCTCTTGCAACTGCAATTGCAACTTCATCTGTTAAACTAGCAAAAACTCACTCAGTTACAAGACTTCCACCTTTTGCTAGTGTCGTGAAAGATGTCGATAGGAAAGTTATTAGAAGAAGTGGTACACATAAGGAAGACACGCAGAGGCAAGGGTTGAAATGGCCACGTGCCAACATCACGACGGAGGAGGTGAAATTCAAAATTCAGAAACCATGCAAATACTTTAATAGTTCAAGGGGTTGTCGCAATGGTTCTAATTGCCATTATCAGCATGACGTGTCAGGAATGAGTCGAATTGCTAAAAGACTGAAATTTATAACTTGTAAGGGTGTAATACAGAACAGCTTAGAATTGGAAGAGTTAGTTATATTCAAGCCAACCAGAAATATATTCAAGCCAGAGCTGCTGAGGGTGGGAATGGGGAGCAAAGGAGTATACCAAAGTCCTTCATGGCTATGA 1008 0.4137 MREDRAVEGALPAKHHDVGYNKKKFFKNQPTSSKNTTNNQNKGKGKKKSYPPCQYCGKMGHPPFRCWRRPDAKCSSSSSESWLIDSCYTNHMTYDRELFKCLNNTEVKWVRIGNGEQIPCLVQGLPCLESKIPDCRACQQGKQSRLPLKQSTWRATEKLQLIHVARPHNNPSLNGSSYDDSLTPLATAIATSSVKLAKTHSVTRLPPFASVVKDVDRKVIRRSGTHKEDTQRQGLKWPRANITTEEVKFKIQKPCKYFNSSRGCRNGSNCHYQHDVSGMSRIAKRLKFITCKGVIQNSLELEELVIFKPTRNIFKPELLRVGMGSKGVYQSPSWL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13178g00002 335 ProSiteProfiles Zinc finger C3H1-type profile. 249 277 IPR000571 GO:0046872
Mupr13178g00002 335 MobiDBLite consensus disorder prediction 1 23 - -
Mupr13178g00002 335 MobiDBLite consensus disorder prediction 1 49 - -
Mupr13178g00002 335 MobiDBLite consensus disorder prediction 25 45 - -
Mupr13178g00002 335 SUPERFAMILY CCCH zinc finger 254 275 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13178g00002 Mupr-Chr13178 15130 17093 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr13178g00002 zf-CCCH 0.00028 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13178g00002 - - gsj:114367763 139.043