Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13169g00004 ATGATTCTGTCATTAGAAAATAACTTTTTTGGAGTGAGCAGAGTATATAGTGAGTTCTACTTGGAAGATATTAGCAAAGACAGTCCCAATAGTACATGGACAGCTCAGGACAACAAAGCGTTTGAAAGAGCTCTAGCTGTTTATGACAAGGACACCCCTAACCGTTGGTGCAATATTGCAAGGGCTGTTGGTGGAAAAACTCCAGAGGAAATCAAGAGACACTATGATGTCCTTGTGGAGGACATTAGGCGTATTGAGTCAGGCCAAGTGCCCTTTCCAACCTATAGGAACCTCAAAGATGATGCATGA 309 0.4239 MILSLENNFFGVSRVYSEFYLEDISKDSPNSTWTAQDNKAFERALAVYDKDTPNRWCNIARAVGGKTPEEIKRHYDVLVEDIRRIESGQVPFPTYRNLKDDA 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13169g00004 102 ProSiteProfiles SANT domain profile. 28 83 IPR017884 -
Mupr13169g00004 102 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 27 97 IPR044636 GO:0003700
Mupr13169g00004 102 SMART sant 29 81 IPR001005 -
Mupr13169g00004 102 FunFam Transcription factor SRM1 21 92 - -
Mupr13169g00004 102 CDD SANT 32 75 IPR001005 -
Mupr13169g00004 102 Pfam Myb-like DNA-binding domain 32 75 IPR001005 -
Mupr13169g00004 102 ProSiteProfiles Myb-like domain profile. 25 79 IPR001005 -
Mupr13169g00004 102 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Mupr13169g00004 102 Gene3D - 24 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13169g00004 Mupr-Chr13169 16633 18661 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr13169g00004 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13169g00004 - - aprc:113867554 144.821