Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13166g00001 ATGGTTGATGCCCCTGATAGCATGTATGCCCAAGCGATGCATACAAAAACTGAAAAAGTTAGTAGTAGATGGGTGCATGCGACAGAAAAAGAGTGCCATGAACTTAGGGATCATCTTGATGATGTTGCAATGGGTAAGGACTTGGCTATGGGAATATCTTTGAATGTGGAACTAGATCATCCACTTGAGGAACTGTCTAGCAATCCAATGGGTAAAGAGACAAATAAGATGTCTGATGTAGATGATATGCAGCTCATTAATGGACAGAGTAATGTGAGTGAAAAAGGACATCTGGAATTCAATGGTGATAAAACCATGATACAGGAAAATCAGGCTATGAATGTCATTGATGTTACTGATAGCAACAGTCCACAGGCTGAAAGCAGAGACTTGAACACTCCAAATGGGTTTTCTGGTTTCTCACAAACAAAAGCAGACTGTTGCTCCAAACAGCATCCATCCCTTGAACTAACTTTGAAAAGGTTGGGAGAAGTAAGAGATTCTAAAAATGTCACAGGTGATGAATGCAATGTCTTGAGACATTCATATCTGTCTGCATTCTCAAAATATAATACTGCTTCTTCCGCTAACCAGGCTCAAACTGGAAATATAGGAAGCTGTTCCCCACTAGACAATTATTGCTCAGGTGCACCAAATAGAGAGACAATACACAACTTTCCATCTCATTCAAATGGCACTCCTCCAAATCAACAGTCTAATGGGAGCAACAACATCAACGACATAACATCCACTAATACATATCTTGGCACCAAACCTGATAATTTTGACAAGCAGCCAGAGTCTGGAAGAGGGATTGGCTCGTTTAATTCTTCTGAACTCCAAATTCTGCAGAACAATAGCATCTCTTCATCTCGGAAGAAAACTTCTGCCCAGGAAGAATATACAGAAATCATTAAAGGACAAGTGGGAGGCTCAGAACAAGGATTTCAAGTCGAGCACACTCACTATCAGTTTCACCCTTATAATCACATTGCACATAAAGCTGCAGGAGATTTCCAATCAGATCATGATATCTTACTGAAAAGCTCAACCAAAGCTGCTCAGCAATGTGTATCATCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTATGGCATGGAAGGAAATGCAATGGAGAGCGATCATGGGAGCAATGGACAGGATGGAAGCAACACCTTGACAATAAGAACAATAAATGTGGAAAACGGCAATGTGGCTGCTGGGAGCATTGGATTTGGTGGCATTGATAGGAAAAACTTAGGGAATGGGGCAGATGAAGGACGACTTGCTTTGAGAGAGGCTGCCTTGACCAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAGAGGGTTCGATATCACAGCAGGAAAAAACTTGCAGAACAGCGGCCACGTATTAGGGGACAATTTGTCAGACGAATAGTGTCTGAAACCAAAGAAGAAAAAGATAAACAAAGTGCCAACCTG 1479 0.4131 MVDAPDSMYAQAMHTKTEKVSSRWVHATEKECHELRDHLDDVAMGKDLAMGISLNVELDHPLEELSSNPMGKETNKMSDVDDMQLINGQSNVSEKGHLEFNGDKTMIQENQAMNVIDVTDSNSPQAESRDLNTPNGFSGFSQTKADCCSKQHPSLELTLKRLGEVRDSKNVTGDECNVLRHSYLSAFSKYNTASSANQAQTGNIGSCSPLDNYCSGAPNRETIHNFPSHSNGTPPNQQSNGSNNINDITSTNTYLGTKPDNFDKQPESGRGIGSFNSSELQILQNNSISSSRKKTSAQEEYTEIIKGQVGGSEQGFQVEHTHYQFHPYNHIAHKAAGDFQSDHDILLKSSTKAAQQCVSSNAFGGPAESNAANYGMEGNAMESDHGSNGQDGSNTLTIRTINVENGNVAAGSIGFGGIDRKNLGNGADEGRLALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSETKEEKDKQSANL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13166g00001 493 ProSiteProfiles CCT domain profile. 435 477 IPR010402 GO:0005515
Mupr13166g00001 493 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 203 477 IPR045281 GO:0009909
Mupr13166g00001 493 MobiDBLite consensus disorder prediction 219 259 - -
Mupr13166g00001 493 MobiDBLite consensus disorder prediction 364 394 - -
Mupr13166g00001 493 MobiDBLite consensus disorder prediction 219 278 - -
Mupr13166g00001 493 Pfam CCT motif 435 476 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13166g00001 Mupr-Chr13166 461 5265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13166g00001 1 482 Response Regulator Gene Family AT5G02810 32.207 2.42e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr13166g00001 CCT 1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13166g00001 K12129 - gmx:100785796 641.343