Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13155g00002 ATGGAGGGATCTCAGTACTTGATGTATGTGAAGAGAGAAGAAATCCTGAAGTGGAACCTTGAAGCACCAGTTGGAGATGACAACACCAATTACTCATGGGAAGAAAGGGCTTTTGCTGAAGACTCAACTAGGGTACTTGGTGGGAGCATGTGGCCTCAAAGATCTTACTCTTGTACCTTCTGTAAAAGAGAGTTCAGGTCTGCTCAAGCCCTTGGGGGTCACATGAATATCCACAGGAGGGACAGGGCTAGGCTCAAACAAAATCTTAGCCCTCATCATCATCTTCATCACAAAAATGATTTCATCAAATCCTTATTAGGCAATCATCATTTTTCTGCACCAGAGATCTCCACCCAGATAGACTGTGATCTTAGTGCTTATTCTTCTAGCCCTGCAACTGCAATTACAACAACCAGACTCTCATGCATGTCCACACAAGAAAATTGTGGTCAGCATAATTTTCCACCTTATTCTTCTCATTCTATTATCTTGGGGTCTCCTACTTCAGATCAAGAAGTGGTGGTCAATCCAAGGGAGTACAATTTTGATGGCTTGGGTTGTAATAATTATGTTGAAACAAGTTTGTCTGTGGGACTGACTTCCATGTTTGGCCAAAAATCATTACCAACCACCGTTTCTTGTGGGGACAGAAACAACATGAGATGTAAGAAACTAAAGACTAGCATTTCTTCTCTGCCTCTCTTCCTCAACCCATGTTCAAATGATAAAAGCTTGTCTTTTCAATCTGCGGAAATTTCACTTGGACTTAATCATGGAATGGAAGACTTGGATCTTGAACTCAGACTAGGGAAACAACACAAAAGTTTAGTATTCAGTGAAGGTAGAATGACAAAGGAAGATACTTTACTAAAGTAA 876 0.4075 MEGSQYLMYVKREEILKWNLEAPVGDDNTNYSWEERAFAEDSTRVLGGSMWPQRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNLSPHHHLHHKNDFIKSLLGNHHFSAPEISTQIDCDLSAYSSSPATAITTTRLSCMSTQENCGQHNFPPYSSHSIILGSPTSDQEVVVNPREYNFDGLGCNNYVETSLSVGLTSMFGQKSLPTTVSCGDRNNMRCKKLKTSISSLPLFLNPCSNDKSLSFQSAEISLGLNHGMEDLDLELRLGKQHKSLVFSEGRMTKEDTLLK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13155g00002 291 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Mupr13155g00002 291 Pfam C2H2-type zinc finger 56 79 - -
Mupr13155g00002 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Mupr13155g00002 291 SUPERFAMILY beta-beta-alpha zinc fingers 53 82 IPR036236 -
Mupr13155g00002 291 Gene3D Classic Zinc Finger 45 109 - -
Mupr13155g00002 291 SMART c2h2final6 56 78 IPR013087 -
Mupr13155g00002 291 PANTHER OS07G0101800 PROTEIN 27 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13155g00002 Mupr-Chr13155 20539 21694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13155g00002 28 149 C2H2 Transcription Factor Family AT2G37740 45.902 2.88e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13155g00002 - - gmx:102662367 325.479