Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13149g00005 ATGAATTCAGAGAAGCCAGTCAGCCTTGAGATTTTAAGTGAAGAAATTGATCATCATCATCATCAAGAAGAAGCACGTGATGATGACACTGATGGAACCAAACGCTCTTATGAGTGCACATTCTGCAGAAGAGGCTTCACAAACGCTCAGGCTTTAGGGGGTCACATGAATATCCATAGGAAAGACAGGGCCAAGGCCAAGCAATTCACACTAGACGCTTCATCTTCAATTGACAAATTCAACAATAATGATGAATCCTTGGCCCTTCCTTTTGTCTCAGAAATTTTAAACCAACAACCCACAAGGCCTTTCTCCGTTTTGGAGTCTCAGAGAAACTGTGACATGCACTTTCATCCACCACCACCTGCGCATGCCTTTTGTTATGAGTTTTATAACCCAAGGTCAAGGCCTTTGAGTTTGAACCAAGACCTTCGGGCTGCCAATTTGAGTCTCCAAATTGGTCCAACTCATGTTGATGATATTCATCAAGTCAGGAGAGGCAATCAGAAAGACAGTGAAGTGGACTTGGAGCTCAGACTTGGCCATGATCCATACTGA 558 0.4355 MNSEKPVSLEILSEEIDHHHHQEEARDDDTDGTKRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQFTLDASSSIDKFNNNDESLALPFVSEILNQQPTRPFSVLESQRNCDMHFHPPPPAHAFCYEFYNPRSRPLSLNQDLRAANLSLQIGPTHVDDIHQVRRGNQKDSEVDLELRLGHDPY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13149g00005 185 MobiDBLite consensus disorder prediction 1 33 - -
Mupr13149g00005 185 SUPERFAMILY beta-beta-alpha zinc fingers 34 63 IPR036236 -
Mupr13149g00005 185 MobiDBLite consensus disorder prediction 10 33 - -
Mupr13149g00005 185 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Mupr13149g00005 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Mupr13149g00005 185 PANTHER OS07G0101800 PROTEIN 24 183 - -
Mupr13149g00005 185 Gene3D Classic Zinc Finger 13 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13149g00005 Mupr-Chr13149 46811 47368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13149g00005 2 182 C2H2 Transcription Factor Family AT3G09290 33.684 1.57e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr13149g00005 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13149g00005 - - gmx:102665558 257.684