LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr13143g00003	ATGTGGTTGCCAAAGAATCAATTAGAAAAGAAGGATGGCGTGAATGGATTAGTAGCAGTGGCAATAGATAAAGAAAAAGGGAGCCAAAATGCACTAAAATGGGCCGTTGACAATATCCTGGTCAGAAGTTCAACTGTAGTTCTCATCCATGTCAAGCTTATTTCACCTTCTCTAGCTCCATCGCCTTCTTTTTTCACCCCAAGGATAGGTTCTCTCCTTGGTGATGATAGTTCAGTGGTAGGCAAAGAAACCGAGAGCCAAAACAAAAACATTTTCCTCCCATACCGTGTCTTCTGTACACGGAAAGATATACAATGCAGGGACGCCTTACTAGAAGATGTAGATATAGCCAAAGCTATAAATGAATATGTTTCTCAGGCAGGAATTGAGCATCTGGTTCTTGGCTCTTCAACAAAAACTGGTAAGATTCATTCAATGCGATCTGCTTCTCGCCCTGCTCCGGCCATTGTCCCTAAACTGCACAGTCAAGCTAGTGTCAGGTCAGAGCGTCCAGACCCATTTGTGCCATTGGCTCCAAGCATAAAAGAACAAGAAGTGCATTCCTTTGAAGCACCAGAAAATAAATTGTATGATGGAACAGAATCATTCAGGTCACCATTCACTAGGAAACGTTACAATGGAAGACAATTTGGGGAAACTCCCAAGACAGACAGTGACATATCCTTTGTAAGCACTGGAAGGCCAAGCACTGATCGCTTGTTCGCTTCATTAAACAACTCAGAGACAGGAATGTCCAACCCTAGGCTATCATATAGCTCAGACACAGATGCAAACTTCAGCTTTGAGTCAATGCATTATGGAAGGAAGTCTACGGATAGTGGCACTGCTCCTGAATTCTCATCTCTCTCATTTGAAAGTGATAGGCATTCATATTCTTCATCACAAGCCGTGGATGATATGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTGAAGCAAACAATGGAAATGTATAACACAGCCTGTAAAGAAGCACTCACAGCACAGCAGAAGGCAGTGGAACTTCAGCGGTGGAAACTAGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTGGCTGAGGAAGCAGCACTGGCGATTGCAGAAAAGGAGAAAGCCAAGTCTAGAGCAGCCATTGAGGCTGCTGAAGCACAAAGGAGGATTGCAGAACTGGAAGCACACAAGAGACTCAATGCAGAAATGAAAGCACTTAGAGAATCAGAAGAGAAAAGAAAAGCACTTGATGCTTTGGTGAGTGTAGATATCAGGTATAGAAGGTACCCAATCGAGGAGATTGAATCTGCAACAGAATTTTTTTCAGACTCCCTGAAAATTGGAGAAGGGGGATATGGTCCAGTTTATAAGTGCCTTTTGGATCACACATCTGTTGCAGTCAAGGTTCTACGCCCTGATGCACAACAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTGCTCCTCCTAGGAGCATGTCCAGAATACGGGTGTCTAGTGTACGAGTACATGGCAAATGGAAGCTTGGACGATTGCCTCTTTCGGCAAGGCAACAAACCCCCACTTCCTTGGCAGCTAAGGTTCAAAATAGCAGCTGAAATAGGGACAGGCTTGTTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGAGACTTAAAACCAGCCAACATCTTGCTGGACAGAAACTATGTTGCCAAAATCAGCGACGTAGGTTTGGCCAGGCTAGTTCCACCATCTGTGGCAGACTCTGTGACACAATATCACATGACATCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGTATGTTAGGGGTGAAATCAGACATATACTCCCTTGGGATCATTTTTTTGCAAATTTTGACCGCAAAATCACCAATGGGTTTGACCCATTATGTTGGAAGGGCAATTGAGAACGGAACTTTTGCTGAGACATTGGATCCATCAGTGCCTGATTGGCCAATGGAGGAGGCCTTGAAGTTTGCTAAGATGGCAGTGCAGTGTGCTGAATTAAGGCGCAAAGACAGACCTGACCTTGGCCAGGTTATCCTACCACAGCTCAACAGGCTAAGAGACCTTGCTGAAAATAATAATCTACTTCCACTTTTTCCTAACTCTACCAATGTCTCCCATAAGAGACAAGTTTCTATGCAGCTGGTAAGTTTCCATCTGTGA	2217	0.4475	MWLPKNQLEKKDGVNGLVAVAIDKEKGSQNALKWAVDNILVRSSTVVLIHVKLISPSLAPSPSFFTPRIGSLLGDDSSVVGKETESQNKNIFLPYRVFCTRKDIQCRDALLEDVDIAKAINEYVSQAGIEHLVLGSSTKTGKIHSMRSASRPAPAIVPKLHSQASVRSERPDPFVPLAPSIKEQEVHSFEAPENKLYDGTESFRSPFTRKRYNGRQFGETPKTDSDISFVSTGRPSTDRLFASLNNSETGMSNPRLSYSSDTDANFSFESMHYGRKSTDSGTAPEFSSLSFESDRHSYSSSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSRAAIEAAEAQRRIAELEAHKRLNAEMKALRESEEKRKALDALVSVDIRYRRYPIEEIESATEFFSDSLKIGEGGYGPVYKCLLDHTSVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRQGNKPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADSVTQYHMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHYVGRAIENGTFAETLDPSVPDWPMEEALKFAKMAVQCAELRRKDRPDLGQVILPQLNRLRDLAENNNLLPLFPNSTNVSHKRQVSMQLVSFHL	738

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr13143g00003	738	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	411	510	-	-
	Mupr13143g00003	738	Gene3D	Transferase(Phosphotransferase) domain 1	511	714	-	-
	Mupr13143g00003	738	Coils	Coil	304	324	-	-
	Mupr13143g00003	738	Gene3D	HUPs	17	150	IPR014729	-
	Mupr13143g00003	738	ProSiteProfiles	Protein kinase domain profile.	438	701	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr13143g00003	738	Pfam	Universal stress protein family	18	141	IPR006016	-
	Mupr13143g00003	738	Gene3D	Phosphorylase Kinase; domain 1	417	510	-	-
	Mupr13143g00003	738	SMART	serkin_6	438	701	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr13143g00003	738	Coils	Coil	330	410	-	-
	Mupr13143g00003	738	MobiDBLite	consensus disorder prediction	212	232	-	-
	Mupr13143g00003	738	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	556	568	IPR008271	GO:0004672\|GO:0006468
	Mupr13143g00003	738	SUPERFAMILY	Protein kinase-like (PK-like)	419	697	IPR011009	-
	Mupr13143g00003	738	FunFam	U-box domain-containing protein 51	511	711	-	-
	Mupr13143g00003	738	Pfam	Protein kinase domain	441	692	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr13143g00003	738	CDD	STK_N	17	149	-	-
	Mupr13143g00003	738	PANTHER	OS02G0152300 PROTEIN	18	718	-	-
	Mupr13143g00003	738	MobiDBLite	consensus disorder prediction	218	232	-	-
	Mupr13143g00003	738	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	141	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr13143g00003	Mupr-Chr13143	15445	20189	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr13143g00003	1	724	Receptor kinase-like Gene Family	AT1G78940	53.696	0.0	733

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Mupr13143g00003		Pkinase	5.6e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr13143g00003	-		-	gmx:100803461	1108.2