Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13142g00006 ATGGAAGACTTTGCTTGGACATGTTTAAGAAATTGTTTCATCCTAAAGCTTGTTAGTACCACTTATAAGGTAAAATTTTTTTCTTCCGAAGATTGTCCTTCAAAAGTTGGCCAGCAATCTAAAGATCATCATCGACCAAAGACATTGTCAACATGGCCTTCAACTATTAAATGGAAATGTCCTCCTATGATTGCTCTGAGTGATGGTTGGCGCGTTACAACGGGTGAAGAAAGTAAGGAAAAACATGATCAGGAACTAAGAGAAAAGAGAGAACTTGAAGCATTTTATCCTCGCATTTCATCCATTCCTCTGGGACCTTATGTTTCTTCTGCAGTGGAGAAGGAATGTTACGATGATAGCCTCACTCCTCTCGTCCCTCTTAGTCCTATTGAGGAGCAAGATGATTCAGTAGAGAATATTAAAGTTGATGCTGCAGTCACAAAACATGCAGAGTCTTCTACTAAAGAATTGCAGTCAAACTTGCAGCAAAATATACCACCAGCGACATCTCTCGTTAACTCTCAATGCAGTGAAAAGCCAGAGGCAGTTCCTGCAACATCTTTTTTGGAGGCAGATTTAGTTGGGGCGTCTGTTGCTGTTGCATCTGCCATCATGAAAAGCAATGAACAAGGAAACAAGATTGATGTGGATTTACTTCTTCAAATATTTAGTGACCCAATAATGGTAGCAAAAATAATTGAGAAATATAGAAATTCTAGCACCATTATGAGCACACCCACTTTTTATTCTAAACCTAGCACTTCATCAATTCCATTATCTTCGACTACCCCCAACACCACAGTTAGTTTATTGCCTGCTTCTGAGCCAAGTGTAGCAACTCCATCAGTTTCACTGCTGACATCTACAACAGATAATCCTGCAACTCCACCTGTGTCTGCTCAACCAGCAAAAACTCACTTTGTTACAAGTCCTACTCCTCCATCTCCACCTCATATGCACAGGTCAGTCAACAAAAATATTTCCCATATGCCAAATAGAGTGGTTCCCTCTTTAAATACCAACCCTCCAAAACAAGAGGTGAAGCCAGATGCACCATTGGCTTCAGTCTTCTCCACAATCATGCATGGAGTTGAAAAACAGGTGGGATCCACCACTGCTGGTGCCGTGAAAGATGTCAACTTTTATAAGAACCTTGTTAGAAATCATGGTACTCATAGGCAAGACATGCAGAGTCATAGTAATCTGCAAGATTTGAAACGGCCACGTAACAACATCATTAAACCGGTGGAGGTGAAATTCCAAATTCAGAAACCATGCAGATTCTTTAACCGTTTAAAGGGTTGCCGCAATGGTTCTAATTGCCCTTATCAGCATGACATGTCAGGAACCGTCCTAACAACTCATAAGGCTAAAAGATTGAAAGTAGTTCCAAAAACTACCTGGAAGATGTAA 1413 0.4055 MEDFAWTCLRNCFILKLVSTTYKVKFFSSEDCPSKVGQQSKDHHRPKTLSTWPSTIKWKCPPMIALSDGWRVTTGEESKEKHDQELREKRELEAFYPRISSIPLGPYVSSAVEKECYDDSLTPLVPLSPIEEQDDSVENIKVDAAVTKHAESSTKELQSNLQQNIPPATSLVNSQCSEKPEAVPATSFLEADLVGASVAVASAIMKSNEQGNKIDVDLLLQIFSDPIMVAKIIEKYRNSSTIMSTPTFYSKPSTSSIPLSSTTPNTTVSLLPASEPSVATPSVSLLTSTTDNPATPPVSAQPAKTHFVTSPTPPSPPHMHRSVNKNISHMPNRVVPSLNTNPPKQEVKPDAPLASVFSTIMHGVEKQVGSTTAGAVKDVNFYKNLVRNHGTHRQDMQSHSNLQDLKRPRNNIIKPVEVKFQIQKPCRFFNRLKGCRNGSNCPYQHDMSGTVLTTHKAKRLKVVPKTTWKM 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13142g00006 470 MobiDBLite consensus disorder prediction 251 308 - -
Mupr13142g00006 470 ProSiteProfiles Zinc finger C3H1-type profile. 420 448 IPR000571 GO:0046872
Mupr13142g00006 470 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 50 462 - -
Mupr13142g00006 470 MobiDBLite consensus disorder prediction 251 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13142g00006 Mupr-Chr13142 32392 34321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13142g00006 56 126 Homeobox Transcription Factor Family AT4G02560 43.662 3.27e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr13142g00006 zf-CCCH 0.00024 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13142g00006 - - adu:107488052 335.495