Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13139g00004 TTCACAGTTATGCGTATAACCAGTGTATTAGCAAATGGCAGCGCTCTTCTTTTCCCTTTATCTCGATTTCTATGTGCCTGCCATCATTCACCAACCAAGTTGTTTGTTGCAGGGCTTTCCTACAATACCAATGAACCAGTTCTGAGAGAAGTCTTTGGGCAACACGGTGAAATCATTGAAGTTAAAGTAATATGTGATCACGTGACTGGGAAATCAAGAGGGTATGGATTCGTGCGGTTCGTTTCTGAAATTACAGCTGCTACAGCTCGCGAAGAAATGAACGGCCAGATACTGGATGGCAGACGCATTCGGGTGAGTTATGCGCACAAAGGAGATTTCCTGGCTCTCCATGTTCAAACTGATCGGTGA 369 0.4472 FTVMRITSVLANGSALLFPLSRFLCACHHSPTKLFVAGLSYNTNEPVLREVFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSEITAATAREEMNGQILDGRRIRVSYAHKGDFLALHVQTDR 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13139g00004 122 FunFam Glycine-rich RNA-binding protein 2, mitochondrial 20 111 - -
Mupr13139g00004 122 SUPERFAMILY RNA-binding domain, RBD 30 111 IPR035979 GO:0003676
Mupr13139g00004 122 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 110 IPR000504 GO:0003723
Mupr13139g00004 122 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 29 111 - -
Mupr13139g00004 122 SMART rrm1_1 33 106 IPR000504 GO:0003723
Mupr13139g00004 122 Gene3D - 26 112 IPR012677 -
Mupr13139g00004 122 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 104 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13139g00004 Mupr-Chr13139 18072 19260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13139g00004 34 119 Eukaryotic Initiation Factors Gene Family AT4G34110 30.208 8.59e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13139g00004 K13195 - gmx:100306540 195.282