Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1312g00003 TTCTTCATCATTCTTCTTTCTAATCACGATATTCAATTTGGGCCTTCACTCTTCGCATTTATTCGCACTTGCCTCCGTTTTGTTTCTTTCCGCTTTCAATTATTCCTTCTTTTCGGTTTTTGGGGTCTTGCTCTGATCCCGAGCCTCCTTCGAGATTGCTTTTCCTTTTTGACCATTTTGTTTCTCGTGAACGATATTGTATTCTTACTTGGGACTTGGGAGCAGGAGAAGAAAAAGGTGAAAATGTTTACATGCATAACTTGTACAAAGCAAGCGGCGGAGGACGGGGAAGAAGGCGGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGAGCGCGCAGTTAAAGGATATGGCACTGAAGTTTTCAGGTGCTTACAAGCAGTGCAAACCTTGCACAGGGTCCAGTACCTACAAGAAAGGACAGAGACCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAACTTCAACCCCTGCTTGGGACTTCACAAGCTCCAATTTCCCTGGTGGTAGATCAGACCAAAGGTTTATGGGGGGACTCAGTGGTGATAGGACCCCTAGAGGTCCTGGGTCAGCACCAGCCTCTGATGTAGTTGTTGAGGATGAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTCGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTACGACAGGATCATGGAACTTTACAACGTCCAGAGATTCAATCAACAAGCTCTCAACACTCCTTCGAGATCTGAGGATGAGCAAAGAGATTCCTCTTACTCAAGACTGGCATCTACACAAGACAGTCCCATGGCCTCGTTTTTAAAGGGTTGGACACCGAGGAATAACCCCTCTGAAGCTATAGATCAAGGTGGTGGCCAAAACTTGCATGCAGGGTCATCCGTGGAAGCATCAAGGACAACCACCTCTTCTAGAGATGAACCTTCAATGAGCAATGCCAGTGACTTGGAGACAGAATGGATAGAGCAAGATGAGCCTGGAGTCTACATTACAATCAGGCAATTGGCTGATGGAACAAAGGAGCTTCGCCGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGGACATGCAAAGAAATGGTGGGAAGATAACAGAGAAAGAATCCAAGCTCAATATCTTTGA 1260 0.4659 FFIILLSNHDIQFGPSLFAFIRTCLRFVSFRFQLFLLFGFWGLALIPSLLRDCFSFLTILFLVNDIVFLLGTWEQEKKKVKMFTCITCTKQAAEDGEEGGESGTPSTKEAVKSLSAQLKDMALKFSGAYKQCKPCTGSSTYKKGQRPYPDFDTISEGVPYPYIGGASSTSTPAWDFTSSNFPGGRSDQRFMGGLSGDRTPRGPGSAPASDVVVEDEDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNQQALNTPSRSEDEQRDSSYSRLASTQDSPMASFLKGWTPRNNPSEAIDQGGGQNLHAGSSVEASRTTTSSRDEPSMSNASDLETEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEDNRERIQAQYL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1312g00003 419 ProSiteProfiles BRX domain profile. 364 419 IPR013591 -
Mupr1312g00003 419 Pfam Transcription factor regulating root and shoot growth via Pin3 220 274 IPR013591 -
Mupr1312g00003 419 Pfam Transcription factor regulating root and shoot growth via Pin3 363 418 IPR013591 -
Mupr1312g00003 419 PANTHER PROTEIN BREVIS RADIX-LIKE 1 82 419 IPR044532 -
Mupr1312g00003 419 MobiDBLite consensus disorder prediction 299 363 - -
Mupr1312g00003 419 MobiDBLite consensus disorder prediction 284 366 - -
Mupr1312g00003 419 Pfam Transcription factor BRX N-terminal domain 102 135 IPR027988 -
Mupr1312g00003 419 ProSiteProfiles BRX domain profile. 220 275 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1312g00003 Mupr-Chr1312 6115 11856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1312g00003 77 419 Major Intrinsic Protein MIP AT1G31880 64.722 4.35e-154 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1312g00003 - - gmx:100809614 610.527