Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13122g00012 ATGCATCATGGAACTGATTTTCTCCTCCAACCCATTTTCACACGCGGGGTATCTGCTTCACTCCACCTAGTCTTGTTGCTTGTGCTTGTTGTGTCTTGGGTATGGAAGAAAGTGCAAGTGGACCATAGAGAAAAGAGTGAAAGAAATGGATTCCACAATTCTGGTTTCTTGTACTACAAACACACTCTGGTTTGTAGTTTAGTTATTTGTGTGTTCAATCTTGTGTTGTGCTTACCAAGCTACTTTTACTTGCATAAACATGATGGTTCAGAGGAGGTTGTCACACTTTCTGATTTGGCCCTCAAAACAGTTGTTTGGGGTGCTGTGTGTGCTTATTTACATTCTAGAAACTCAAAGGCACAGGATATGAGTTTCCCACGTTTGTTGAGAACTTGGTGCTGGGTCTATGCTTTTGTTTCTTGTTGTTGCCTTATTATTGACTTTGTAGTCTATGGAAGGGATGATTTCTTGCCAATTATATACCTTGTTTCTGATATAGGTTCCTCTATTACGGGCTTATTTCTATGTTATGTGGGATATTCTTTTAACAATATGGCTAAGCTTGCCCTTCTTGAAGAGGCCCTTTTGAATGGTGACTCTAGTGTAAGAAACAATTCTGGTAATAGTAAGACTAGAGGAAATGAAAATTTGACCCGTTATTCAAATGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATCAGTCCAATAATAACCCTAGGCAATGAGAAGACTTTAGACCATGAGGACCTCCCGCTTCTTGCTACTGATGACAGTGCCTATGGGGTTTTTCCAACTTTTAGAAACAAACTTGAGTCAGAGTGTGGTAGTGTTAGGAATGTGTCCACACTTAAACTGGCGAAGGTGTTATTCTTGTCAACATGGAAAGGGATCATTTTATCAGGTTTATTTGCATTCCTGTACACATGTGCTTCTTATGTTGGACCCTCTCTTATTGACATCTTTGTTCAATACCTCAATGGGAAACACACGTTTAAAAGTGAAGGCTATGTTTTGGCTATGGCATTTGTTGCTGCAAAGCTCGTGGAGTGTCTTTCAGAGAGGCACTGGATGTTTCGGTACCAGCAGGTTGGGGTTAGGATGCAATCAAAGCTGGTGGCAATGATCTATGCTAAAGGATTGACTCTTTCAGGCCAAGCAAAGGAGGGTCGCAGCACTGGGGAAATCATTAACTTAATGACTGTTGATGCTGAAAGGATTGGTGAATTTTGTTGGTACATGCATGAACCGTGGATGTGCGTTCTGCAAGTTGCTTTGGCCCTGTTAATTCTCTATAGAAGTGTAGGGGTTGCTTCTGTAGCTGCTCTTGCTGCAACTGTAATTGTGATGTTGCTAAACCTTCCTGTGGCATCATTGCAAGAAAAGTATCAAGGCAAGGTAATGGAGTTCAAAGATAAAAGAATGAAGGCTACGTCTGAGATTCTGACCAATATGAGGATTCTAAAACTTCAAGCATGGGAAATGAAGTTCTTATCGAAGATTATTCAGCTTAGGAAGACTGAGGAGATATGGCTAAAGAAATTTCTAGCCGGTACAGCAATTATTAGATTTCTCTTCCATAACGCCCCAACTTTTATTGCTGTGGTTACTTTTGGAACTTGTGTTCTTATCGGCATCCCACTGGAATCAGGGAAGGTCTTATCTGCACTTGCAACATTCAGAATTCTTCAAATGCCCATCTATGGTCTTCCTGACACAATTTCAATGATTGCACAAACTAAGGTTTCCCTTGAAAGGATTGCATCATTTCTTCGTCTAGATGAGTTGCAGACTGATGTGGTAGAGAAGCTTCCATGGGGTAGTTCTGAGAAGGCAATTGAATTAGTAGATGGAAATTTCTCTTGGGATTTATCTTCCTCTAATTCAACTTTGAAAAATGTAAATCTTACAGTTTCTCATGGTATGAGGGTTGCTGTATGTGGTACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATAATAGGGGAAATACCAAAGATATCTGGGACCCTGAAGATATGTGGAACAAAGGCTTATGTTTCTCAATCACCATGGATACAGAGTGGTAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGACAGGGAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTTGAGGTTCTACCATTTGGAGATCAGACCATTATTGGAGAGAAGGGGATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCCCGTGCTCTATATCAAGATGCTGATATATATCTGTTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTGATATACATAACACATCAAGTAGAATTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGAGGGAAGGATAACTCAATCAGGAAAATATAATGACATTCTCATGTCAGGGACTGATTTTATGGAACTTGTAGGTGCACACAAAGCAGCTTTGTCTTCAATTAAGTCTTTAGAGAGAAGACCAACATTTAAAAGATCAAGTTCCATCAAGGAGGATACAAATTCATTAGGTGATTTTGAACTTGAGCAAAATGTGGAAAACATATATGATCAAAATGATATGTCAGATGACACAGATGAGCGGAAAGGACAACTTGTTCAAGAAGAAGAACGGGAAAAGGGTAGAGTTGGGTTTGAAGTATACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTTTCACAGACACTCACTGTGGGCTTTCAGATTGCAAGCAATTATTGGATGACTGTGGCCACTCCTGTTTCAGTAACTTCAGAACCTGATATTGGAAGCTTTACACTTATGGTTGTGTATGTTGCTTTGGCAATTGGAAGTTCCATTTTCACCTTTGCTAGAGCATTTATTGCTGTGATAGCTGGATACAAGACAGCCACTATGCTCTTCAGTAAAATGCATTTGTGCGTTTTTCGAGCACCAATATCATTTTTTGATGCCACCCCAAGTGGGCGAATCCTTAATAGAGCTTCAACAGATCAGAGCACACTAGATATGTACATTTCAAATACAGCATGGGCAATTACCCTCAATCTGATTCAACTCTTGGGAAATGTTGTTGTGATATCGCAGGCTGCATGGCAGGTGTTTATAATATTGATTCCTGTCATGGCAGCATGCATATGGTACCAGCGATACTATTCTGCATCAGCAAGAGAATTGGCACGATTAGTTGGTACATGCCAAGCTCCAGTTATACAACATTTTTCGGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTAATGACATAAATTTGAAATTGATAGACAGATATTCCCAGCCCAAATTATACAGTGCTACTGCAATTGAATGGCTGAATTTCAGATTGGATATTTTATCCACTCTCACATTTGCCTTCTGTTTGGTTTTCTTGGTATCTTTTCCAAATTCAATTACTTCTCCTGGCATTGCGGGATTGGCTGTCACATATGGACTTAATCTAAACTCCATACAAACTAAAATAATCTGGTTTCTTTGCACTTTGGAGAACAAAATTATATCTGTTGAAAGAATACTCCAGTACACATCCCTTCCAAGTGAAGCTCCTCTTGTGATAAAAGACAATCAACCGGATTATTCTTGGCCATCATTTGGAGAGGTTCATATCCGGGATTTACAGGTTCGATATGCTCCTCACTTGCCTATTGTTTTACGAGGTCTTACTTGTACTTTCACTGCTGGA 3810 0.3958 MHHGTDFLLQPIFTRGVSASLHLVLLLVLVVSWVWKKVQVDHREKSERNGFHNSGFLYYKHTLVCSLVICVFNLVLCLPSYFYLHKHDGSEEVVTLSDLALKTVVWGAVCAYLHSRNSKAQDMSFPRLLRTWCWVYAFVSCCCLIIDFVVYGRDDFLPIIYLVSDIGSSITGLFLCYVGYSFNNMAKLALLEEALLNGDSSVRNNSGNSKTRGNENLTRYSNAGFFSILTFSWISPIITLGNEKTLDHEDLPLLATDDSAYGVFPTFRNKLESECGSVRNVSTLKLAKVLFLSTWKGIILSGLFAFLYTCASYVGPSLIDIFVQYLNGKHTFKSEGYVLAMAFVAAKLVECLSERHWMFRYQQVGVRMQSKLVAMIYAKGLTLSGQAKEGRSTGEIINLMTVDAERIGEFCWYMHEPWMCVLQVALALLILYRSVGVASVAALAATVIVMLLNLPVASLQEKYQGKVMEFKDKRMKATSEILTNMRILKLQAWEMKFLSKIIQLRKTEEIWLKKFLAGTAIIRFLFHNAPTFIAVVTFGTCVLIGIPLESGKVLSALATFRILQMPIYGLPDTISMIAQTKVSLERIASFLRLDELQTDVVEKLPWGSSEKAIELVDGNFSWDLSSSNSTLKNVNLTVSHGMRVAVCGTVGSGKSSLLSCIIGEIPKISGTLKICGTKAYVSQSPWIQSGKIEDNILFGKEMDREKYEKVLEACSLTKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLKSKTVIYITHQVEFLPDADLILVMREGRITQSGKYNDILMSGTDFMELVGAHKAALSSIKSLERRPTFKRSSSIKEDTNSLGDFELEQNVENIYDQNDMSDDTDERKGQLVQEEEREKGRVGFEVYWKYITTAYGGALVPFILLSQTLTVGFQIASNYWMTVATPVSVTSEPDIGSFTLMVVYVALAIGSSIFTFARAFIAVIAGYKTATMLFSKMHLCVFRAPISFFDATPSGRILNRASTDQSTLDMYISNTAWAITLNLIQLLGNVVVISQAAWQVFIILIPVMAACIWYQRYYSASARELARLVGTCQAPVIQHFSETISGSTTIRSFEQESRFNDINLKLIDRYSQPKLYSATAIEWLNFRLDILSTLTFAFCLVFLVSFPNSITSPGIAGLAVTYGLNLNSIQTKIIWFLCTLENKIISVERILQYTSLPSEAPLVIKDNQPDYSWPSFGEVHIRDLQVRYAPHLPIVLRGLTCTFTAG 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13122g00012 1270 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 220 1270 - -
Mupr13122g00012 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 835 IPR027417 -
Mupr13122g00012 1270 FunFam ABC transporter C family member 5 598 845 - -
Mupr13122g00012 1270 SUPERFAMILY ABC transporter transmembrane region 293 592 IPR036640 GO:0005524|GO:0016020
Mupr13122g00012 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 299 579 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13122g00012 1270 CDD ABC_6TM_ABCC_D1 300 587 IPR044746 GO:0140359
Mupr13122g00012 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 926 1206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13122g00012 1270 FunFam ABC transporter C family member 5 887 1224 - -
Mupr13122g00012 1270 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524|GO:0016887
Mupr13122g00012 1270 Gene3D - 595 856 IPR027417 -
Mupr13122g00012 1270 Gene3D ABC transporter type 1, transmembrane domain 271 594 IPR036640 GO:0005524|GO:0016020
Mupr13122g00012 1270 Gene3D ABC transporter type 1, transmembrane domain 886 1224 IPR036640 GO:0005524|GO:0016020
Mupr13122g00012 1270 CDD ABC_6TM_ABCC_D2 924 1218 IPR044726 GO:0140359
Mupr13122g00012 1270 FunFam ABC transporter C family member 10 282 595 - -
Mupr13122g00012 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 836 IPR003439 GO:0005524
Mupr13122g00012 1270 Pfam ABC transporter 631 765 IPR003439 GO:0005524
Mupr13122g00012 1270 CDD ABCC_MRP_domain1 613 813 - -
Mupr13122g00012 1270 SUPERFAMILY ABC transporter transmembrane region 924 1225 IPR036640 GO:0005524|GO:0016020
Mupr13122g00012 1270 SMART AAA_5 640 813 IPR003593 GO:0016887
Mupr13122g00012 1270 Pfam ABC transporter transmembrane region 298 566 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13122g00012 1270 Pfam ABC transporter transmembrane region 926 1169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13122g00012 Mupr-Chr13122 26338 31150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13122g00012 592 862 Calmodulin-binding Proteins AT2G36910 28.276 1.37e-23 106