Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13122g00002 TACTTTTACTTGTATAAACATGATGTTCCAGAGGAGCTTGTCTCACTTTCTGATTTGGCTTTCAGAGGAGTTGTTTGGGGTGCTGTGTGTGTTTATTTACATTCTAGAAACTCAAAGGCACAAGATCTGAGTTTCCCACGTTTGTTGAGAACTTGGTGCTGGGTCTATGCCTTTATTTCTTGTTGTTGCCTTGTTATTGACTTTGTAGTATATGGAAAGCATGTTTTGTTGCCAATTATACACCTTGTTTCTGATATAGGTTTATTTCTATGTTATGTGGGATCTTTTGTTAACAACATGGCTAAGCTTGCCCCTCTTGAAGAGGCCCTTTTGAATGGTGACTCTAGTGTAAGCAACAATTCTGATCATAGTAAGACTAGAAGAAATGAAAATTTAACCCGCTATGTTTTGGTTATGGCATTTGTTGCTGCTAAGCTTGTGGAGTGTCTTTCACAGAGGCACTGGATGTTTAGGATCCAGCAGGTTGGGGTTAGGATGCAGTCAAAGTTGGTGGCAATGATCTATGCTAAAGGTTTGACTCTGTCGTGTCAATCAAAGGAGGTTCATAGCACTGGAGAAATCATCAATTTAATGACTGTTGATGCTGCAAGGATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTTTGCAAGTTGCTTTGGCATTGTTAATTCTCTACAGAAGTGTAGGGGTTGCTTCAATAGCTGCTCTTGATGCCACTGTAATTGTGATGTTGCTAAACCTTCCTGTGGCATCCCTGCAAGAAAAGTTCCAAGGCAAGGTAATGGAGTTCAAAGATAAGAGAATGAAGGCTACATCTGAAATTCTGAAGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAATTCTTATCAAAGATTATTCAGCTTAGGAAGACTGAGGAGATATGGCTAAAGAAATTTCTAGTTGGTACAGCAATTGTTAGATTTGTCTTCAACAACACCCCAACTTTTATTGCTGTGGTTACTTTTGGTGCTTGTGTTTTTATGGGAATCCCACTTGAATCAGGGAAGGTCCTATCTGCACTTGCAACATTCAGAATTCTTCAAATGCCCATCTACAGTCTTCCTGACACTATTTCAATGATTGCACAAACTAAAGTTTCCCTTGATAGGATTGCATCATTTCTTCGTCTAGATGAGTTGAAGACTGATGTAGTAGAGAAGCTTCCATTGGGTAGTTCTGATAAGGCAATTGAATTAGTAAATGGAAATTTCTCTTGGGATTTATCTTCCCCTAATACAACATTGAAAAACATAAATCTCACAGTTTTTCATGGTATGAGTGTTGCAGTATGTGGTACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATAATAGGGGAAGTACCAAAGATATCTGGGACCCTGAAGATATGTGGAACAAAGGCTTATGTTTCTCAATCACCATGGATACAGAGTGGCAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGACAGGGAAAAGTATGAGAAGGTGCTAAAAGCATGTTCCTTGAAAAAAGACCTTGAGGTTCTACCATTTGGAGATCAGACCATTATTGGAGAGAAGGGGATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCCCGTGCTCTATATCAAGATGCTGATATATATCTGTTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCCCATATCTTTAAGGAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTGATATACATAACTCATCAAGTAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGAAGGAAGGATAACTCAATCAGGAAAATACAATGACATTCTCATGTCAGGGACTGATTTTATGGAACTTGTAGGTGCACACAAAGCAGCTTTGTCATCACTCAAGTCCTTGGAGAGAAGGCCAACATTTAAAACATCAAGCACCACCAAGGAGGACACAAATTCATCAAGTGATTTTGAACTTGAGAAAAATGTAGAAAACATTTATGATCATCAAAGTGATAAGTCAGATGACACAGTTGAGGCCAAAGGACAACTTGTTCAAGAAGAAGAACGGGAAAAGGGTAGAGTTGGGTTTAAAGTCTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCTTAATATTACTTTCAACGACACTCACTGTGGCTTTTCAGATTGCAAGCAATTATTGGATGACTGTAGCAACTCCTGTTTCAGTAACTTCAGAACCTGATATTGGAAGCTTTACACTCATGGTTGTCTATGTTGCTTTGGCAATTGGAAGTTCCATTTTCACCTTTGCTAGAGCATTTCTTGCTGTGTTAGCTGGATACAAGACAGCCACTATACTCTTCAATAAAATGCATTTGTGCATTTTTGGAGCACCAATATCATTTTTTGATGCCACCCCAAGTGGGCGAATCCTTAATAGAGCTTCAACAGATCAGAGCGCACTAGATATGTACATTTCAAAAATAGTATGGGCAATTGCCCTCAATCTGATTCAACTCTTGGGAAATATTGTTGTGATATCTCAAGCTGCATGGCAGGTGTTTATAATATTGATTCCTGTCATGGCAGCATGCATATGGTAC 2631 0.39 YFYLYKHDVPEELVSLSDLAFRGVVWGAVCVYLHSRNSKAQDLSFPRLLRTWCWVYAFISCCCLVIDFVVYGKHVLLPIIHLVSDIGLFLCYVGSFVNNMAKLAPLEEALLNGDSSVSNNSDHSKTRRNENLTRYVLVMAFVAAKLVECLSQRHWMFRIQQVGVRMQSKLVAMIYAKGLTLSCQSKEVHSTGEIINLMTVDAARIGEFCWYMHDPWMCVLQVALALLILYRSVGVASIAALDATVIVMLLNLPVASLQEKFQGKVMEFKDKRMKATSEILKNMRILKLQAWEMKFLSKIIQLRKTEEIWLKKFLVGTAIVRFVFNNTPTFIAVVTFGACVFMGIPLESGKVLSALATFRILQMPIYSLPDTISMIAQTKVSLDRIASFLRLDELKTDVVEKLPLGSSDKAIELVNGNFSWDLSSPNTTLKNINLTVFHGMSVAVCGTVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSQSPWIQSGKIEDNILFGKEMDREKYEKVLKACSLKKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHIFKECLLGLLKSKTVIYITHQVEFLPDADLILVMREGRITQSGKYNDILMSGTDFMELVGAHKAALSSLKSLERRPTFKTSSTTKEDTNSSSDFELEKNVENIYDHQSDKSDDTVEAKGQLVQEEEREKGRVGFKVYWKYITTAYGGALVPLILLSTTLTVAFQIASNYWMTVATPVSVTSEPDIGSFTLMVVYVALAIGSSIFTFARAFLAVLAGYKTATILFNKMHLCIFGAPISFFDATPSGRILNRASTDQSALDMYISKIVWAIALNLIQLLGNIVVISQAAWQVFIILIPVMAACIWY 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13122g00002 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 633 IPR027417 -
Mupr13122g00002 877 Gene3D ABC transporter type 1, transmembrane domain 44 392 IPR036640 GO:0005524|GO:0016020
Mupr13122g00002 877 Gene3D ABC transporter type 1, transmembrane domain 686 877 IPR036640 GO:0005524|GO:0016020
Mupr13122g00002 877 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 137 377 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13122g00002 877 Pfam ABC transporter 429 563 IPR003439 GO:0005524
Mupr13122g00002 877 SMART AAA_5 438 611 IPR003593 GO:0016887
Mupr13122g00002 877 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 65 877 - -
Mupr13122g00002 877 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 411 634 IPR003439 GO:0005524
Mupr13122g00002 877 ProSitePatterns ABC transporters family signature. 536 550 IPR017871 GO:0005524|GO:0016887
Mupr13122g00002 877 SUPERFAMILY ABC transporter transmembrane region 129 390 IPR036640 GO:0005524|GO:0016020
Mupr13122g00002 877 FunFam ABC transporter C family member 10 92 393 - -
Mupr13122g00002 877 CDD ABCC_MRP_domain1 411 611 - -
Mupr13122g00002 877 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 725 877 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13122g00002 877 Gene3D - 393 655 IPR027417 -
Mupr13122g00002 877 SUPERFAMILY ABC transporter transmembrane region 710 876 IPR036640 GO:0005524|GO:0016020
Mupr13122g00002 877 CDD ABC_6TM_ABCC_D1 135 385 IPR044746 GO:0140359
Mupr13122g00002 877 FunFam ABC transporter C family member 5 396 643 - -
Mupr13122g00002 877 Pfam ABC transporter transmembrane region 725 875 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr13122g00002 877 Pfam ABC transporter transmembrane region 119 364 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13122g00002 Mupr-Chr13122 4094 7886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13122g00002 411 667 Calmodulin-binding Proteins AT2G36910 28.520 4.39e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13122g00002 - K05666 gmx:106794105 1293.49