Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13121g00001 ATGGCGATTATAGCTGATTGCCAACAACAATCAAACCAAATTGTTTTCTCTGTTTTCTATGACGTGGATCCATCTCATGTAAGATATCAGCATGGGGTGTACGAGAATGCCTTTGTTTTGCAAAGACAAAATTTCAAAAAAGACACGGACAAGGTTCATAGATGGGAGAGAGCTATGACGGGTTTGGCCAGTTCAGTTGGTTGGCATGTCAGAAACAAGCCAGAATTTGAACAAATTGAAAATATTGTTGAAGCGAGAACGGATTATGTTAAGCGAATTCTAGACTGCTGTGGTTTATACCCTCACATTGGAATTCCAGGAATCATAGAGAAATCACTCATAACTATTAGAGATCAAGAAATTCATATGCATGAAATGTTACAAGAATTGGGAAAGAAAATTGTCCGCAATCAGTCTCCAGAAGAGCCAGGATCTTGGAGTAGAATATGGCTGAGTGATAACTTCTTTCGCATCTTGACGACAAAAACGGGAACAGATAATGTTAAAGCCTTAGTTCTAGATAAAAAAGAAGATATCTCCAAATGTAGCGTTGATAGATTGTAA 564 0.3777 MAIIADCQQQSNQIVFSVFYDVDPSHVRYQHGVYENAFVLQRQNFKKDTDKVHRWERAMTGLASSVGWHVRNKPEFEQIENIVEARTDYVKRILDCCGLYPHIGIPGIIEKSLITIRDQEIHMHEMLQELGKKIVRNQSPEEPGSWSRIWLSDNFFRILTTKTGTDNVKALVLDKKEDISKCSVDRL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13121g00001 187 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 173 IPR044974 GO:0006952
Mupr13121g00001 187 Gene3D - 1 95 IPR035897 -
Mupr13121g00001 187 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 68 IPR035897 -
Mupr13121g00001 187 Pfam TIR domain 3 76 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13121g00001 Mupr-Chr13121 2560 4141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13121g00001 88 174 WRKY Transcription Factor Family AT4G12020 36.364 2.79e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13121g00001 - - vra:106778604 168.703