Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13117g00003 GTTGAAACGCTTGAAGCGAAGGTGCAAAGTGTGACAGAGGAGAATCGTACTCTAAGAGTGATGCTGGAAACTCTGAGCACCAAATGTGAAAAGCTTCAGTCTCATCTTCATGAGATCGATAATGCACAACAAGTGGCCACCAAAAGTGGGTCAGTATTAGTAACACCCGAGTTTTCCCTAGCACAAAAGCCATCACAAATCTTTGTCAGAACCCACTCCAAGGACAATAGTTTGGTGGTAAAAGATGGTTATCAGTGGAGGAAGTATGGACAGAAGATTACCAAAGACAATCCTTCGCCTAGAGCTTATTTCAAATGCTCCATGACTCCTAGCTGCCCCGTCAAGAAAAGGGTGCAAAGAAGCATACAGGATAGGTCTATCCTTGTTGCAACTTATGAAGGAAAGCACAACCATGGTGTTTTTCATGATTTACTCAAGCCATCATCATCTACATCCCAAGGCTCAATAATGACTAATAATTTACCAATGACAAACATGCCTAGCCATAAGGATAAGATGAACATTGACCTTTGTCTATGTAATTGGGCTCAAACAGATATAAGACCTCGTGAAGATGTTAAGCAACAAAATGACCGTGGCAGCAACAACAAAATTGAAGACTATTTAAATTCTCTAATCAAAGATCCTGATTTCACCATACCATTGGCTGAAGAAGTTGTCCGTTCCATCAATAGCCAGAGTATGCAACTAGGTCTCAACCTGAATTTGGGTCTTCCAGAACCCCACTTGTACTCCATGCAGAACACAAAATTGTAG 777 0.4131 VETLEAKVQSVTEENRTLRVMLETLSTKCEKLQSHLHEIDNAQQVATKSGSVLVTPEFSLAQKPSQIFVRTHSKDNSLVVKDGYQWRKYGQKITKDNPSPRAYFKCSMTPSCPVKKRVQRSIQDRSILVATYEGKHNHGVFHDLLKPSSSTSQGSIMTNNLPMTNMPSHKDKMNIDLCLCNWAQTDIRPREDVKQQNDRGSNNKIEDYLNSLIKDPDFTIPLAEEVVRSINSQSMQLGLNLNLGLPEPHLYSMQNTKL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13117g00003 258 Pfam WRKY DNA -binding domain 81 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr13117g00003 258 Coils Coil 1 42 - -
Mupr13117g00003 258 Gene3D WRKY domain 64 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr13117g00003 258 SMART WRKY_cls 80 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr13117g00003 258 ProSiteProfiles WRKY domain profile. 75 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr13117g00003 258 SUPERFAMILY WRKY DNA-binding domain 76 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr13117g00003 258 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 54 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13117g00003 Mupr-Chr13117 5700 6648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13117g00003 57 138 WRKY Transcription Factor Family AT1G80840 65.854 6.15e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr13117g00003 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13117g00003 - - gmx:121175041 348.206