Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr130g00001 ATGGATCAGCGAAACTCACCAGACTCGTCCAAACCCGCTTCAGATTCGGCACCCGAACACGCCACTCTCACCCCTAATCACTGCCGCAACTCACAGCTTCTGAGGGAAAGAGAGAAAGAGAGAGGCGAAGGGGAAAACGAGGATCTCAGTGCCGCACGAAAGGTTCTCAAGGCAGACCGCGAGAAACTCAGAAGGGATCGACTCAATGAACACTTCCAAGAGTTGGGAAACACGTTAGATCCTGATAGACCAAAGAATGACAAGGCAACTATCCTTACTGAGACCATCCAAATGCTAAAGGACTTAACCGCCGAAGTTAGTAGGCTTAAAACGGAGCATAAAGCACTTTCTGAAGAATCACGCGAACTAATGCAAGAAAAGAATGAACTCAGAGAAGAGAAGACATCTCTAAAATCTGATATAGAAAATCTTAATGCCCAGTATCAGCAGAGAGTCAGAATCATGTTCCCATGGACTGCAATGGACCATTCTGTTGTCATTAGTCCACCTTACTCATATCCACTTCCTATACCTATCCCTCCTGCTCCAATCTCCATCCACCCATCTCTTCAACCTTTTCCATTCTTTGCAAATCAAAACCCTGCTCACATTCCCAATCCTTGTTCAATCTATGTCCCTTATTCAACTCCAACTAACCCCCCACTTGAGCCGCCATCGGCTCTCTATGCTCAAAGATGTAACCACTCTCATGACGTGGCCACAGAGCTTGAGCTTAAGATGCCTGGATCATCATCAACACAACCGGATTGCAGTTCTGGAGGAAGGAAGGGCAAGCATTCAGTGATGAAGGATAGAACCATAAAAGATGGAAGCTCTTCAAGCCAGTATTCTTCGTCTCAAGGACTTCAAGATAGCTCCAACAGCGTGAGTGACATCCCAAAGACTGATAATTGA 915 0.4601 MDQRNSPDSSKPASDSAPEHATLTPNHCRNSQLLREREKERGEGENEDLSAARKVLKADREKLRRDRLNEHFQELGNTLDPDRPKNDKATILTETIQMLKDLTAEVSRLKTEHKALSEESRELMQEKNELREEKTSLKSDIENLNAQYQQRVRIMFPWTAMDHSVVISPPYSYPLPIPIPPAPISIHPSLQPFPFFANQNPAHIPNPCSIYVPYSTPTNPPLEPPSALYAQRCNHSHDVATELELKMPGSSSTQPDCSSGGRKGKHSVMKDRTIKDGSSSSQYSSSQGLQDSSNSVSDIPKTDN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr130g00001 304 CDD bHLH_AtILR3_like 57 131 - -
Mupr130g00001 304 MobiDBLite consensus disorder prediction 246 304 - -
Mupr130g00001 304 MobiDBLite consensus disorder prediction 1 52 - -
Mupr130g00001 304 MobiDBLite consensus disorder prediction 246 260 - -
Mupr130g00001 304 Gene3D - 50 127 IPR036638 GO:0046983
Mupr130g00001 304 Pfam Helix-loop-helix DNA-binding domain 53 102 IPR011598 GO:0046983
Mupr130g00001 304 Coils Coil 92 147 - -
Mupr130g00001 304 MobiDBLite consensus disorder prediction 31 52 - -
Mupr130g00001 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 102 IPR011598 GO:0046983
Mupr130g00001 304 MobiDBLite consensus disorder prediction 274 304 - -
Mupr130g00001 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 122 IPR036638 GO:0046983
Mupr130g00001 304 PANTHER TRANSCRIPTION FACTOR BHLH121 231 303 IPR044579 GO:0003700|GO:0006879
Mupr130g00001 304 MobiDBLite consensus disorder prediction 1 30 - -
Mupr130g00001 304 Coils Coil 46 66 - -
Mupr130g00001 304 SMART finulus 58 108 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr130g00001 Mupr-Chr130 2953 6607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr130g00001 42 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 55.365 1.19e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr130g00001 HLH 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr130g00001 - - gmx:100818281 422.935