Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13095g00004 ATTCGCTTAATCCATAACCGATTCAATTATTCACAAGGCGAGGGAGAGGATGATGATGACGATGATGATGATGATGAGCAAGATCTTAACATGGGAATAGCCACACCTTCGTCATCACTTGCTTCTATTCTCTCACACTCGAAGACACACCAAAACCATTTCAATTCTATGTCCCAAGATTACCACCACCAAGGAATCTTCAGCTTCCCGAATGGGTTCGAAAGATCGGCTACTGCGATGACGCACCAAGACCCTCAGCAACAGCAGATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGAGCAGCAACCTCCGTTGGTTCCCATAGAGGAAGACGAATCGGGGAGCCTCCCCGTGTACGAAACCGCCGGGATGTTATCGGAGATGTTCAATTTTCCTCCGGGCACCGCCGAATTATTAGAACAGCAACAACATCAACAACAGCAACAACAACAATCAATGACGACGACGTTTCGCTCCTCCGCCAGGACAGTGGGCAGTGGTGGCAGCGAGTGGTACGGAAATAGACAAGGGATGTTAACCGGGTTGGGACCGTTGGGAGATTCGAAGAATCATCATCATCATGGCAGTGTAAATAGCCGTGACAGTAGCAGCAGCATAGTTCAGCATCAGCATCATCATCATCAACACAACCACCACCATCATCAGATTTCAAGTATTAATGCAGATTCTGCAGCTGCCATGCAGCTTTTCCTTATGAACCCGCAAACCACCAGATCCCCTTCCCCTCCTCCTCCTCCTTCATCTTCTTCTACTCTCCACATGTTGCTCCCCACTTTCCCTCCCGGCTCGGGTGGGTCTTTTGGTCAATTCACGTGGCTCCCCGATACGGCCCAAGAAGGAGGACCAAGTACTGTCATGGAAGGCCCTGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCAGGGCCTTTCTTTATCTTTGTCCTCCTCTTTAGAAGCCGCCAAAGCGGAGGAACTGAGGATGGGGGATAGCGGGTTTTTGTATTACAATCAAGCAAGTGGAGGACCCTCTTCTTACAAAAGTACTACTCTTGGGGGTCATCACCACCAAGCATTGTTGGGACAGAACCACCAGGGACATGTTGGGTTTGGGGCAGCATCCTCGTCAACATCATCGTTAGGTGTGGTGAATGCGTTGAGGAATTCAAAATACGTCAAGGCAGCTCAGGAATTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGCCAGTTCAAGAAGAACAAGTTCAATAGGCAGCTATCAAACCCTAGCTCCAATCTCGGAGGCAGCGGGGGTGGCGGCGGTGCTTCTTCGTCTACATCAAAGGATGTTCCTCCTTTGTCGGCAGCTGATAGGATTGAGCATCAAAGGAGGAAGGTGGACCGAAGATACAGCCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTCGACATGGTGATGGGTTTCGGCGCTGCGGTGCCGTACACAGCGCTAGCGCAGAAAGCAATGTCTCGTCACTTCAGGTGTCTGAAGGATGCGATAACAGCACAGCTGAAGCATAGTTGTGAGCTTCTTGGAGAGAAAGACGGGGCAGGGAACTCAGGCTTGACCAAAGGAGAGACTCCAAGGCTTAAGATGCTCGAACAAAGCCTAAGGCAGCAAAGGGCGTTTCATCAGATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGCTTGCCAGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTCCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCGAGGGTTCGTTTGTGGAAACCCATGGTGGAAGACATGTACCAACAAGAACTTAAAGAAGCTGAAGGGGCAGAAGAAGAGAGAGAGAGAAACCAAAGCAGCAGCAACAGTGGCCACCAATTGGCACAAACTCCAACGCCCTCAACCACGGCATCGACAGCAACAGCGCCACCACCACCAACAACATCGACAGCGACGACACCACCAACAGCCAAAAGATCCGATTTCAGTGAAAGCGACCCTTCACTCGCAGCATTAAATAATAGGCCACAGGGTGGATTCTCGGAAACGCAACCCAACTCCGCCACCACCGTCACCGCCACCGCCTCTGAGGTGGCGCCTCCGTCGGAGCTTCCCCCGCACGGCAGGTCCATGGTCGCCGACGAATCGTGCAGGCACGGTAGCTTGGTTGCGACGGATTTTGGGACCGCTTCTGGCGCTTCTGACATTGGTTCCACTATGATTAGGTTTGGGACCACCGCCGGTGACGTGTCACTCACACTAGGGCTCCGTCACGCCGGGAACATGCCGGAGAAAACTCCGTTCTCCGTTAGGGACTTTGGAGGCATTTAA 2442 0.5172 IRLIHNRFNYSQGEGEDDDDDDDDDEQDLNMGIATPSSSLASILSHSKTHQNHFNSMSQDYHHQGIFSFPNGFERSATAMTHQDPQQQQIRRDKVRVQGFEQQPPLVPIEEDESGSLPVYETAGMLSEMFNFPPGTAELLEQQQHQQQQQQQSMTTTFRSSARTVGSGGSEWYGNRQGMLTGLGPLGDSKNHHHHGSVNSRDSSSSIVQHQHHHHQHNHHHHQISSINADSAAAMQLFLMNPQTTRSPSPPPPPSSSSTLHMLLPTFPPGSGGSFGQFTWLPDTAQEGGPSTVMEGPGHGHGHGHGHGHGHGHGHGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNQASGGPSSYKSTTLGGHHHQALLGQNHQGHVGFGAASSSTSSLGVVNALRNSKYVKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNLGGSGGGGGASSSTSKDVPPLSAADRIEHQRRKVDRRYSHYCEQMHMVVNSFDMVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGNSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEEERERNQSSSNSGHQLAQTPTPSTTASTATAPPPPTTSTATTPPTAKRSDFSESDPSLAALNNRPQGGFSETQPNSATTVTATASEVAPPSELPPHGRSMVADESCRHGSLVATDFGTASGASDIGSTMIRFGTTAGDVSLTLGLRHAGNMPEKTPFSVRDFGGI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 424 453 - -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 242 320 - -
Mupr13095g00004 813 Gene3D - 574 636 - -
Mupr13095g00004 813 SMART HOX_1 571 635 IPR001356 GO:0003677
Mupr13095g00004 813 SMART prehox3 389 519 IPR006563 -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 5 33 - -
Mupr13095g00004 813 Coils Coil 634 657 - -
Mupr13095g00004 813 FunFam BEL1-like homeodomain protein 4 574 636 - -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 140 227 - -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 642 749 - -
Mupr13095g00004 813 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 214 657 - -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 657 734 - -
Mupr13095g00004 813 ProSiteProfiles 'Homeobox' domain profile. 568 631 IPR001356 GO:0003677
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 424 464 - -
Mupr13095g00004 813 Pfam Associated with HOX 395 518 IPR006563 -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 140 171 - -
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 642 656 - -
Mupr13095g00004 813 Pfam Homeobox KN domain 588 627 IPR008422 GO:0003677|GO:0006355
Mupr13095g00004 813 SUPERFAMILY Homeodomain-like 573 638 IPR009057 -
Mupr13095g00004 813 CDD homeodomain 571 632 IPR001356 GO:0003677
Mupr13095g00004 813 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13095g00004 Mupr-Chr13095 37938 44693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13095g00004 389 811 Homeobox Transcription Factor Family AT2G23760 53.484 1.51e-138 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr13095g00004 POX 3.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13095g00004 - - gmx:100807143 1110.9