Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13093g00001 ATGCCGCACCCTTCTTTCTACAAGCTTCTTCTATCCTCCACTGTCCAAGCCAACCAACTGACGCTTCCGGATAATTTTACGAAGAAATATGGTGGTGAACTTTCTCCAATTGTTACCCTCTCTGTTCCTGATGGTAGCGCCTGGCGTGTAGCATTGAAAAAGGCAGACAACAAGTATTGGTTCTTTGATGGTTGGCAAGAATTTGTTCAACGCTATTCCGTTGGTGTTGGATACTTGTTGGTGTTCAGATACGAAGGAAAGTCATCTTTCAATGTTCATATTTTTAATTTGGCTTCTTCCGAGATAAACTATCAATCAGCAATGCAAAGCAGTAATGAAAGGCCTTACTTTGCAAATCGTCTTAAATGTTTTGAAGAAATGGAAGATGAAGATTCCACTGAAATCTTGGATTCATCACCTTCCCACCTTGCTCCTGGAAAGAGCTACACACCTCCAGCATTGCAGAATCTGTTCAATGGGTCTAAACTTAATAGCATAAACTGGGGAGAGGGTGGGAATGCCCATTCTTCGAGAAGTGCCAATGATAATCGGTTGACCAGAGACGTTGGAGTTCAGTTTAATGCAGTTGAGTTTAAAAGATCTACTGAAGAGTTGAAATTGCGAGCTTCCATAGAGGAAAGGATTAAAAAAACTGCAAGAAAGAAGCGAAAATCAGATGGCCAGGAACCCTCGGCTGAACACGAAGAGGAGGTAGAAATGCGCTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACTATTACAGCAGAAGAAAGGGAAAGGGCCATCAACGCAGCAAAAGCATTTGAACCGCCTAATCCTTTCTGCCGGTATCTGCCATCCTGCTTTGCAGAAAAGCATTTGAATGGAGTTTCGGGGTTTATTAAACTTCAGATCTCTGATGGGCGACAGTGGCCGGTTCGCTGCCTTTATAGAGGAGGTAGAGCCAAGTTAAGCCAAGGGTGGTTTGAATTTTCATTAGAGAACAACTTAGGGGAAGGTGATGTGTGTGTGTTTGAGCTTCTTAGAATGAAAGAAGTAGTGCTGCAAGTTACCGTCTTTCGGGTTACTGAGGAAGTGGGATTGTTGGGCCCTCCTTTGCAGCAGAACCAAAACATAAGCTCACCTAAACTGTTGAACACTCCCTTGCAGCCACACCTTACTTCTACTAAACTGTTTATTGACATTTTGGCACTCTAA 1203 0.4273 MPHPSFYKLLLSSTVQANQLTLPDNFTKKYGGELSPIVTLSVPDGSAWRVALKKADNKYWFFDGWQEFVQRYSVGVGYLLVFRYEGKSSFNVHIFNLASSEINYQSAMQSSNERPYFANRLKCFEEMEDEDSTEILDSSPSHLAPGKSYTPPALQNLFNGSKLNSINWGEGGNAHSSRSANDNRLTRDVGVQFNAVEFKRSTEELKLRASIEERIKKTARKKRKSDGQEPSAEHEEEVEMRFRFYESASARKRTITAEERERAINAAKAFEPPNPFCRYLPSCFAEKHLNGVSGFIKLQISDGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVTVFRVTEEVGLLGPPLQQNQNISSPKLLNTPLQPHLTSTKLFIDILAL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13093g00001 400 CDD B3_DNA 276 356 IPR003340 GO:0003677
Mupr13093g00001 400 Gene3D - 1 98 IPR015300 -
Mupr13093g00001 400 SUPERFAMILY DNA-binding pseudobarrel domain 2 96 IPR015300 -
Mupr13093g00001 400 SUPERFAMILY DNA-binding pseudobarrel domain 277 357 IPR015300 -
Mupr13093g00001 400 ProSiteProfiles B3 DNA-binding domain profile. 280 358 IPR003340 GO:0003677
Mupr13093g00001 400 PANTHER B3 DOMAIN-CONTAINING 3 350 - -
Mupr13093g00001 400 CDD B3_DNA 4 96 IPR003340 GO:0003677
Mupr13093g00001 400 SMART B3_2 266 358 IPR003340 GO:0003677
Mupr13093g00001 400 SMART B3_2 6 98 IPR003340 GO:0003677
Mupr13093g00001 400 MobiDBLite consensus disorder prediction 222 237 - -
Mupr13093g00001 400 Gene3D - 254 361 IPR015300 -
Mupr13093g00001 400 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Mupr13093g00001 400 MobiDBLite consensus disorder prediction 217 237 - -
Mupr13093g00001 400 Pfam B3 DNA binding domain 278 356 IPR003340 GO:0003677
Mupr13093g00001 400 Pfam B3 DNA binding domain 7 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13093g00001 Mupr-Chr13093 2502 6246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13093g00001 1 359 B3 DNA Binding Superfamily AT3G18990 49.738 2.16e-117 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr13093g00001 B3 6.4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13093g00001 - - gmx:100813285 682.945