Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13092g00008 ATGCCGGTTGATTTGGACAATGTTTCCACCGTTTCAGGGGAAGCCAGCGTGTCTTCCTCCGGCAATCAGACAGTGGCTCCAAAACCCACAACAAAGAAAAAGCGAAACCTTCCAGGAATGCCAGATCCGGACGCGGAGGTGATAGCTTTGTCTCCGAAGACCCTGATGGCAACGAACCGGTTCGTGTGCGAAATTTGCAATAAGGGGTTTCAGAGGGACCAGAACCTTCAGCTTCATCGGCGGGGTCATAACTTGCCGTGGAAGCTGAGGCAGAGGTCGAGCAAGGAGGTGAGGAAGAGGGTGTACGTGTGTCCCGAACCCACGTGCGTTCACCACGATCCTTCTAGAGCCCTGGGCGATCTCACTGGGATTAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGATAAGTGCTCCAAGAAATACGCGGTTCAATCCGATTGGAAGGCTCACTCCAAGATTTGCGGTACCCGAGAGTATAAGTGCGATTGTGGCACTTTGTTCTCAAGGAGGGATAGCTTCATCACGCATAGGGCTTTTTGTGATGCGTTGGCAGAGGAAAGCGCGAGATCTACGCCGCAGACTGTTGTGAAGGCTAGTTCGGAGTCAGAATCGAAGGCTGTGACCGGTGATTCATCGCCTCCGCCGCCGGCGGTGGTGGCTCCGCCACCTCCGGTTAGTTCTCAGTCAAACAGTGTTGTTGTACCATCGCCTGCTTTGCAGACACAAAATCCAGAGTTGCCAGAAAATTCCCCACCAATCATAGAAGAACCGCAGCCTAATACTGCTATGAATGGGAGCTGTAGCAGCACAAGCACCAGCTCAACAAGTAACAGCAATGGAGGTGCTAGCAGCAGTGTATTTGCAAGCTTGTTTGCTTCATCAACAGCATCCGCAACCGCAAGCCTCCAATCTCAAACACCGGCATTCACTGACTTGATTAGGGCCATGGGGCATCCAGATCATCCAGCAGACCTCTCAAGGCCTTCATCCTCGGAGCCCATTTCCCTGTGCCTTGCTACCAATCACGGGTCATCCATTTTTGCAGCGGGAGGGCAGGAGCGCCGTCAGTATACCCCACCTCCACAGCCAGCCATGTCTGCCACTGCATTGCTGCAGAAAGCTGCTCAAATGGGTGCAGCTGCAACAAATGCCTCTTTTCTTCGTGGGTTAGGCATAGTGTCATCTTCTGCATCAACCTCATCAGGTCAGCAAGATAGTTTGCAATGGGGTCAGCAGCCAGTGGAACCAGAGAGTACCTCAGTTCCTGCAGGACTTGGACTTGGGCTTCCCTGCGACAGTAGCTCTGGACTAAAGGAGTTAATGATGGGGACTCCCTCCATGTTTGGTCCAAAGCAGACCACCCTTGATTTTCTCGGGTTGGGGATGGCTGCTGGGGGCACCCCTGGTGGAGGCTTATCGGCACTCATCACCTCCATTGGTGGCGGTCTGGATGTTACTACTGCAGTGGCATCCTTTGGTAGTGGAGAATTCCCTGGCAAAGATATTGGGATGAGCACTTGA 1536 0.5299 MPVDLDNVSTVSGEASVSSSGNQTVAPKPTTKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSTPQTVVKASSESESKAVTGDSSPPPPAVVAPPPPVSSQSNSVVVPSPALQTQNPELPENSPPIIEEPQPNTAMNGSCSSTSTSSTSNSNGGASSSVFASLFASSTASATASLQSQTPAFTDLIRAMGHPDHPADLSRPSSSEPISLCLATNHGSSIFAAGGQERRQYTPPPQPAMSATALLQKAAQMGAAATNASFLRGLGIVSSSASTSSGQQDSLQWGQQPVEPESTSVPAGLGLGLPCDSSSGLKELMMGTPSMFGPKQTTLDFLGLGMAAGGTPGGGLSALITSIGGGLDVTTAVASFGSGEFPGKDIGMST 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 1 42 - -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 9 30 - -
Mupr13092g00008 511 FunFam protein indeterminate-domain 12-like 40 108 - -
Mupr13092g00008 511 Gene3D Classic Zinc Finger 41 107 - -
Mupr13092g00008 511 SMART c2h2final6 102 132 IPR013087 -
Mupr13092g00008 511 SMART c2h2final6 61 83 IPR013087 -
Mupr13092g00008 511 SMART c2h2final6 137 157 IPR013087 -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 195 287 - -
Mupr13092g00008 511 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Mupr13092g00008 511 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 229 253 - -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 402 429 - -
Mupr13092g00008 511 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Mupr13092g00008 511 Gene3D Classic Zinc Finger 115 195 - -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 402 423 - -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 195 214 - -
Mupr13092g00008 511 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Mupr13092g00008 511 MobiDBLite consensus disorder prediction 260 287 - -
Mupr13092g00008 511 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 19 469 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13092g00008 Mupr-Chr13092 56061 58393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13092g00008 1 511 IDZ Gene Family AT5G66730 61.266 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr13092g00008 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13092g00008 K25869 - gmx:100806404 837.41