Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1307g00002 AATTTGGACACCACCACGTATCTTCCGGAGACATTCTTTTGCATCGTCTTATGCATTGCTGGATTGGTTCTATTTTCACTTTTGATTGGAAACATGCAGTTAGACTTGAAGAATGGAGGATTTGGAAAAGAGATACTAAGGAGTGGATGGAGGCATCGCCAGTTACCACAAGATTTGCAGGAACGTGGCCATCGTTTTGTTCAATATAAATGGCTTGCAACAAGAGGAGTTAATGAAGAAGCCATAATGCTTTCGCTGCCTTTGGATCTTCATCGAGAAATTCAACATCACTTGTGTCTTTCTCTTGTGCGCCGTGTTCCCTTCTTCTCGCAAATGGATGATCTACTCCTTGATGCCATATGTGAACGCCTTGTGTCATCACTAAGCACCGAGGGCACCTACATATTTCTAGAGGGTGATCCAGTAGATGAAATGCTGTTTATCATCAGAGGGCAATTGGAGAGCTCCACAACCAATGGAGGAAGGTCTGGATTCTTCAATTCCATCACACTCCGGCCTGGTGACTTCTGTGGAGAGGAATTGTTGACATGGGCCTTAATGCCAAACTCAATCCTCAGCCTACCTTCTTTAACTCGCACTGTCAAAGCTCTTTCTGAAGTTGAAGCTTTTGCACTACAGGCAGAGGATCTGAAGTTTGTGGCAAGTCAGTTCAAGCGCTTACACAGCAAGAAACTTCAGCATGCGTTTAGGTATTATTCCCATCAATGGAGGACATGGGGTTCTTGCTTCATACAAGCTGCTTGGAGAAGGTTTCAGAAAAGAAAGGCAACAAGGGAGTTATCCCTCAAAGAGTGTCTCTACTACATGAGGGATGAAATTGGAAATTGTGAGGAGGATGAGATTGGGGAATCCTCAGGGAGTGTGAAAAGGATTCAGAATCTTGGTGCAACTGTTTTGGCCTCAAGGTTTGCTGCCAATACAAGGAAGGGGACACAAGCTACAAGTCAGTGA 972 0.4444 NLDTTTYLPETFFCIVLCIAGLVLFSLLIGNMQLDLKNGGFGKEILRSGWRHRQLPQDLQERGHRFVQYKWLATRGVNEEAIMLSLPLDLHREIQHHLCLSLVRRVPFFSQMDDLLLDAICERLVSSLSTEGTYIFLEGDPVDEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSILSLPSLTRTVKALSEVEAFALQAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRFQKRKATRELSLKECLYYMRDEIGNCEEDEIGESSGSVKRIQNLGATVLASRFAANTRKGTQATSQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1307g00002 323 CDD CAP_ED 108 239 IPR000595 -
Mupr1307g00002 323 SMART cnmp_10 108 239 IPR000595 -
Mupr1307g00002 323 ProSiteProfiles cAMP/cGMP binding motif profile. 108 238 IPR000595 -
Mupr1307g00002 323 Gene3D Helix hairpin bin 45 98 - -
Mupr1307g00002 323 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 314 - -
Mupr1307g00002 323 FunFam Cyclic nucleotide-gated ion channel 1 106 224 - -
Mupr1307g00002 323 SUPERFAMILY cAMP-binding domain-like 49 233 IPR018490 -
Mupr1307g00002 323 Pfam Cyclic nucleotide-binding domain 131 219 IPR000595 -
Mupr1307g00002 323 Gene3D Jelly Rolls 106 226 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1307g00002 Mupr-Chr1307 16174 17638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1307g00002 1 319 Ion Channels AT5G14870 70.448 1.83e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1307g00002 K05391 - gmx:100802812 515.383