Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13077g00001 ATGGACAAAACAAAACACATTAGTATTGCTTGGAAGAAAGCGCGTAGACATGCTTCTTGTGGAAACTTAGGCACGAAGTTAAAACTTTCCACTGTTACATATCTCTCTCTCTCTCTCACTCTAAAGACACAAGCTGAGGGGTTCTTCTTTCACGTTTGCATCATGAGCTTCTTGAGGCCTTCTGCATTGTACAATTTTCTGATCAGTTACCCGGCAGTGCGATGGATGCCATGTCAGAATTGGGGGTTCCTTCGATGGCCGGGTCTTGACGGCTTCTTCAGGCTTTTCGTGGTTGTGCTTCTCTGGTCCACGTTATCCGAGCTTCGCTTCATACCCTCATCTTCTATGTACCCCACCCTTCGTGTTGGCGATCGAATTATTGTGGAGAAGGCTTCATATTACATCAGGAGTCCTGCTATACATGATATTGTAACATTTAAGGATCCAACACAGCTCTCTGGAGAAGATGCTGTTTTTATTAAGAGAATTGTTGCAAAAGCAGGAGACACTGTTGAGGTTCGTCATGGGGCACTCTACATCAATGGTGTTGCTCAGCAGGAAGATTTCATAGCAGAGCCACCAATATACACAATGCAATTAACTTATGTGCCCAATGGCCATGTTTATGTGTTGGGGGATAATCGTAATAATAGTTATGATTCCCATGTGTGGGGACCACTTCCTATAAAGAACATAATTGGAAGATATGTCACGTGCTACCATAGACCAACAAACATTTGA 741 0.4332 MDKTKHISIAWKKARRHASCGNLGTKLKLSTVTYLSLSLTLKTQAEGFFFHVCIMSFLRPSALYNFLISYPAVRWMPCQNWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSSSMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQLSGEDAVFIKRIVAKAGDTVEVRHGALYINGVAQQEDFIAEPPIYTMQLTYVPNGHVYVLGDNRNNSYDSHVWGPLPIKNIIGRYVTCYHRPTNI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13077g00001 246 SUPERFAMILY LexA/Signal peptidase 105 240 IPR036286 -
Mupr13077g00001 246 FunFam Peptidase/ serine-type peptidase 113 240 - -
Mupr13077g00001 246 ProSitePatterns Signal peptidases I serine active site. 113 120 IPR019756 GO:0004252|GO:0016020
Mupr13077g00001 246 PANTHER SIGNAL PEPTIDASE I 91 244 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr13077g00001 246 NCBIfam signal peptidase I 94 240 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr13077g00001 246 PRINTS Bacterial leader peptidase 1 (S26A) family signature 159 171 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr13077g00001 246 PRINTS Bacterial leader peptidase 1 (S26A) family signature 104 120 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr13077g00001 246 PRINTS Bacterial leader peptidase 1 (S26A) family signature 203 222 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mupr13077g00001 246 Gene3D Umud Fragment, subunit A 113 243 - -
Mupr13077g00001 246 Pfam Signal peptidase, peptidase S26 94 238 IPR019533 GO:0004252|GO:0006465
Mupr13077g00001 246 CDD S26_SPase_I 107 235 IPR019533 GO:0004252|GO:0006465
Mupr13077g00001 246 ProSitePatterns Signal peptidases I signature 3. 208 221 IPR019758 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13077g00001 Mupr-Chr13077 3289 8234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13077g00001 116 235 MADS-box Gene Family AT1G29960 30.579 2.34e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13077g00001 K03100 - gmx:100306121 380.178