Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13076g00003 TTTTTCGAGCGCTGCCCACATCTAGATGAAACCCACGGAGATCAGATAGCCAAGGAATGGGGACTCGAAGCAGAACAAATAAAGCATTGGTTTCAAAACAAGAGGACAAAGGTCATGATAAAAGGAAGGAAGAGCCAGGACAAGATGTACAAAGTTCTACAAACAGCGAAGTACATGGAAATACAGATGTCTCAACCTGAGTCGCGGGTTCCTACCTTTGAAGAAACCTGTGTGGTAAACCGAGGGAATATTTGTGATCCTGACCAAGCTTTAATTTTAAGTCATTGGATGGAAGAAGAAAAAATAGCAAAAGTTGCAGATGAAGCTATGGCAGAACTCCTTAAGCTTATGACCATGAATGGGCCTTTATGGGCCAAGTCTTCATATGGTGGGGGATATATTCTCGTTCGTGAAAAATATGCAAACATGTTTCCTAGGGTTGATAACTTGAACGGTCCTCGCGCTTGTGAAGAATCTTCTAAACATTATAAAGTAGTGAGGATGGGAGCAAGGAAATTGGTTGAGATGCTTTTAGATTCGGAGGAATGGGTTAATTTTTTCCCAACAATTGTTTCAAAATCAGAAACAGTAAAAGTGATTGATGCCGGTTCATTGGAAAATCAAACTGGAGCATTGCAAGTGGTGTATGAAAAAATGAACGCTCTTTCACATTTAGTGTCATCTCGAGAATTATTCTTCCTTCGTTGTTGTCAACAAATTAAAGATACTGTATGGGTCATAGCTCATGTGTCAATTGATTCATTTGGAGGGCGTATCCATGATCTTCCTGCTCGAAGGCTTCCATCTGGCTGCATGATTTATCAAATAACTGAAGAGTTTTCCATGGTTTCTTGGATTGAGCACGTGGAAGTGAATGATAGGATGCGTGCAAGCTCGCAAAGAGGTCTTGTTTGTAACAATATAGAATATGGAGCTGAAAGGTGGCTTTGGGCACTTGGTAGAATGTGTGATAGGTTTGCTTGCATTTCAATTGAAAATATGCCTCAAGCACCGAAAGAAGTGGTGAATTCAACCAATGCAAGGAAGAGAGCAATGAGGCTTTCTAATAGAATGGTTCAGGGCTTTTGTCGAGTTTTGTACAAGTCACGGAATTCACATTCTTCAGAGGAAAACAACAATGAGATAATTAAGATCTCTCTTCGCAACAACACAACACCAGAGATGCCAGAAGGCGTAATTGCCACTGCTGTAACCTCCGTTAGGCTACCCGTCCCTCCTCAAAATATTTTTAGCTTCCTCGCCGAGGCCAAAAACCGTTCTAAGTGGGATGTTCTTAGCTGTGGATTTCCAGTCAACGAGATTACGTACTTCACAATTGGTGGAGATCGTATTTCAATTTTTCTGATTAGTAACCAAATAGAGAGCAATGTGATGGTATTTCAAGATAGTTATAAAGATTGTCTGGGATCGTATGTGGTGCATGCTCCAATTTCTTTAGAAAGCGCGCGCATGATTATGGATGGGGAGGATTCAACGGTGCCAAAAATTCTTCCTTCAGGCTTTCTGATATCTGAAGACAATGGTGCAATTGCTGAAGCATCACATGCCAATAATAGATCAGGAAGCTCACTGTTAACTATTGCTTACCAATTTCTTATTTCTATTAATAATGCACCAATGCGTGACCAATATAGGGAAGCTGTGGTTGGAATCGTCAGTTCAACACTCCACAAGATTAAGACCTCTCTCAATATTTCCGATTAT 1725 0.4064 FFERCPHLDETHGDQIAKEWGLEAEQIKHWFQNKRTKVMIKGRKSQDKMYKVLQTAKYMEIQMSQPESRVPTFEETCVVNRGNICDPDQALILSHWMEEEKIAKVADEAMAELLKLMTMNGPLWAKSSYGGGYILVREKYANMFPRVDNLNGPRACEESSKHYKVVRMGARKLVEMLLDSEEWVNFFPTIVSKSETVKVIDAGSLENQTGALQVVYEKMNALSHLVSSRELFFLRCCQQIKDTVWVIAHVSIDSFGGRIHDLPARRLPSGCMIYQITEEFSMVSWIEHVEVNDRMRASSQRGLVCNNIEYGAERWLWALGRMCDRFACISIENMPQAPKEVVNSTNARKRAMRLSNRMVQGFCRVLYKSRNSHSSEENNNEIIKISLRNNTTPEMPEGVIATAVTSVRLPVPPQNIFSFLAEAKNRSKWDVLSCGFPVNEITYFTIGGDRISIFLISNQIESNVMVFQDSYKDCLGSYVVHAPISLESARMIMDGEDSTVPKILPSGFLISEDNGAIAEASHANNRSGSSLLTIAYQFLISINNAPMRDQYREAVVGIVSSTLHKIKTSLNISDY 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13076g00003 575 ProSiteProfiles 'Homeobox' domain profile. 1 41 IPR001356 GO:0003677
Mupr13076g00003 575 ProSiteProfiles START domain profile. 95 328 IPR002913 GO:0008289
Mupr13076g00003 575 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 571 IPR042160 -
Mupr13076g00003 575 Pfam START domain 105 324 IPR002913 GO:0008289
Mupr13076g00003 575 SMART START_1 104 325 IPR002913 GO:0008289
Mupr13076g00003 575 CDD homeodomain 1 37 IPR001356 GO:0003677
Mupr13076g00003 575 SUPERFAMILY Bet v1-like 97 324 - -
Mupr13076g00003 575 Gene3D - 1 38 - -
Mupr13076g00003 575 SUPERFAMILY Homeodomain-like 1 41 IPR009057 -
Mupr13076g00003 575 Gene3D - 103 308 IPR023393 -
Mupr13076g00003 575 Pfam Homeodomain 1 37 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13076g00003 Mupr-Chr13076 18617 21911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13076g00003 97 571 Homeobox Transcription Factor Family AT1G73360 33.943 1.87e-85 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr13076g00003 START 1.1e-22 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13076g00003 K09338 - gmx:102667038 556.214