Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13073g00003 ATGGAAGTGATGAAGAAGATGAATGAGTCCTCTCCCACAACAACAACAATACGCAGTTACAGTTCTCTTTATTTCAATCCCCTTAGGCACTTTGAAGATGAATTTCAAAACCAGGAAGACAAGGAAAACGCCAACGCAAATGGGTCATGTGGTCGGGTTCAGGTTCAGGTTCAGGCTCAGGCTCAGGCCAAGGGCGGCAGGCCCGAGAGGATCTTGAAGCCCAGGTGGGTTGAAACCCAATCCCTCAACATTTGGGATTACTCTGATTCGGAGGCAGCTCCTGCTTCGTCATGGTCCACTCTGCCCAACAAGTCCTTGATCTGTAGACCCTTGCCGTTAGATATTGGAAGGTGTACCTGTTTTATTCTCAAGGAACCCACCCCCCATGGTCTCTCTGGGGGCACTTTCTTCTCTCTTTATACCTATGAAGGCGAGGGACGCCAGAATAGAAAACTAGCCGTGGCTCACCACAAGCGTCGGAATGGCAGGTCTCACTTTTCCGTAGCTCGGAATGTTATTGGACTTGTCTCTCATTCTGATTTTAAGGATACTTTTCTTGGCACCGTTACTTCTAATCTTATGGGCTCTAAATACCACATTTGGGATCAGGGATATCGTCATAATTCCCTTACTAAACAACAACCTCTTGCTCTTGTCACCTACATTCCTACAGTAACAACATGTGCAGGAAGTCACAGAAGCATGAGGGCGTATATACCCAAGCATCAATCCATGTCCCTCAAGAACACAACCCAGCTACAGCATATAAAAGGATTGCCAATGAATTGGGAGGGAAAACTGGACAAAGTTCATCAACTATTCTCAAAGGTTCCAATTTACAACAAGACTTCAAAGCAATATGAGCTTGACTTTAGAGACAAAGGAAAGGCGGGACTTAGAATACAAAGATCAGTAAAAAATTTCCAGCTCACTTTGGAGGCAGACGATCCTGCAGCTAGGGAGGGTGGGAAAATCAAAATTCGTTATGGACTACAGATTGATTATGCAGGATTTGTATTTGGTGTCTCCAAATACAAATACAAATCATTGTATTCGGAAGACAAAGATACCAAGTGTTCACTCCTCTACTTTCAAGTGTTCTCTCAACTTCCCTAA 1116 0.4435 MEVMKKMNESSPTTTTIRSYSSLYFNPLRHFEDEFQNQEDKENANANGSCGRVQVQVQAQAQAKGGRPERILKPRWVETQSLNIWDYSDSEAAPASSWSTLPNKSLICRPLPLDIGRCTCFILKEPTPHGLSGGTFFSLYTYEGEGRQNRKLAVAHHKRRNGRSHFSVARNVIGLVSHSDFKDTFLGTVTSNLMGSKYHIWDQGYRHNSLTKQQPLALVTYIPTVTTCAGSHRSMRAYIPKHQSMSLKNTTQLQHIKGLPMNWEGKLDKVHQLFSKVPIYNKTSKQYELDFRDKGKAGLRIQRSVKNFQLTLEADDPAAREGGKIKIRYGLQIDYAGFVFGVSKYKYKSLYSEDKDTKCSLLYFQVFSQLP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13073g00003 371 Pfam Tub family 109 330 IPR000007 -
Mupr13073g00003 371 PRINTS Tubby superfamily signature 296 312 IPR000007 -
Mupr13073g00003 371 PRINTS Tubby superfamily signature 185 209 IPR000007 -
Mupr13073g00003 371 PANTHER TUBBY-RELATED 36 313 - -
Mupr13073g00003 371 Gene3D Tubby Protein; Chain A 103 352 IPR025659 -
Mupr13073g00003 371 SUPERFAMILY Tubby C-terminal domain-like 95 316 IPR025659 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13073g00003 79 253 TUB Transcription Factor Family AT1G16070 56.497 1.25e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mupr13073g00003 Tub 1.1e-20 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13073g00003 K19600 - gmx:100803500 431.024