Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13073g00002 ATGGCTAAGACGACGACGTCACAGAAAAGTCTGAACAGTGGGGGGAGCATTAGCAAGGTGAAGCGGGCACGCAAGAGCATCCCAAGAGACAGAGACACCCCTTCACAACGAAGCTCAATCTACAGGGGAGTCACAAGGCATCGGTGGACAGGTCGATATGAGGCTCATTTGTGGGATAAAACTTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGGGGCGTACGACCACGAAGATGCGGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCGTCCTTAATTTTCCGCTATCAAATTATCAAGACCACCTTAAGGAGATGGAGGATCAATCCAAGGAAGAATATATTGGATCCTTAAGAAGAAAAAGTAGCGGCTTCTCTCGAGGAGTCTCAAAGTATAGAGGCGTGGCAAGGCACCATCACAATGGAAGATGGGAAGCTCGAATTGGCAGAGTCTTCGGCAACAAATATCTATACCTTGGAACTTACGGAACAGAAGAAGAAGCAGCCATGGCGTACGATATGGCGGCCATAGAGTACCGTGGACTGAATGCGGTTACAAACTTTGACCTTAGTCGCTATGTGAAATGGCTACGTCCAAAAGAGCAAGAAACTCCTGGCAAACCTGAGCCTGAAGTTGAAGCCCAACATCTGAGCCCAACAACAACAACAACACCATCTGGCAATGCCACCGCAGCATCTTCAGTTGTGGATTGCCCTCCTCCACCACCACCTCCTCCTCCTCCTCGCACATTCCCTGAAGATATTCAAACATTTTTTGAAAGTCAAGATTCTGGAATCTACGCAGACACTGATGACATTATATTTGGCGACTTGACCTCCATTGCTTCACCAATTTTTCATTGCGAGCTCAATGCTTAG 903 0.4806 MAKTTTSQKSLNSGGSISKVKRARKSIPRDRDTPSQRSSIYRGVTRHRWTGRYEAHLWDKTCWNESQSKKGRQGAYDHEDAAARAYDLAALKYWGQDTVLNFPLSNYQDHLKEMEDQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTEEEAAMAYDMAAIEYRGLNAVTNFDLSRYVKWLRPKEQETPGKPEPEVEAQHLSPTTTTTPSGNATAASSVVDCPPPPPPPPPPRTFPEDIQTFFESQDSGIYADTDDIIFGDLTSIASPIFHCELNA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13073g00002 300 ProSiteProfiles AP2/ERF domain profile. 40 103 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 Pfam AP2 domain 40 95 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 Pfam AP2 domain 138 189 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 SUPERFAMILY DNA-binding domain 39 105 IPR016177 GO:0003677
Mupr13073g00002 300 PRINTS Ethylene responsive element binding protein signature 179 199 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 FunFam AP2-like ethylene-responsive transcription factor 138 199 - -
Mupr13073g00002 300 CDD AP2 138 199 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 MobiDBLite consensus disorder prediction 1 41 - -
Mupr13073g00002 300 SMART rav1_2 139 203 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 SMART rav1_2 40 109 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 MobiDBLite consensus disorder prediction 1 19 - -
Mupr13073g00002 300 MobiDBLite consensus disorder prediction 223 241 - -
Mupr13073g00002 300 ProSiteProfiles AP2/ERF domain profile. 139 197 IPR001471 GO:0003700|GO:0006355
Mupr13073g00002 300 Gene3D AP2/ERF domain 40 105 IPR036955 GO:0003700|GO:0006355
Mupr13073g00002 300 Gene3D AP2/ERF domain 138 199 IPR036955 GO:0003700|GO:0006355
Mupr13073g00002 300 FunFam AP2-like ethylene-responsive transcription factor 39 105 - -
Mupr13073g00002 300 SUPERFAMILY DNA-binding domain 138 199 IPR016177 GO:0003677
Mupr13073g00002 300 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 236 - -
Mupr13073g00002 300 MobiDBLite consensus disorder prediction 208 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13073g00002 Mupr-Chr13073 7563 12580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13073g00002 13 245 AP2-EREBP Transcription Factor Family AT5G57390 56.154 4.17e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr13073g00002 AP2 1.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13073g00002 K09285 - gmx:100807781 407.527