Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13058g00001 ATGACCAATCAGAATCACCGTGTTCCAGATTTCGATATCCAAATGGACGACGACCGGGAATACCCGATTCTCACGCCTTCAGGGTTGCCTCGCCAAAAGAAACCCTCCATTGCAGACGACGACGATATCATGGAGCTGCTATGGCAAAACGGCCAGGTCGTGATGCACAGCCAGAACCACCGTTCGCTAAGAAAACCGCCGCTGCCGAGAAACTCCGACGACGCGTCTCCAGCCGGTCCTTCCACGGCCAGGGAGATTCGACCTCAGGTGGAAAACTACAACCAATATCTCTTCATGCAAGAAGGCGAAATGGCTTCGTGGCTTCACTATCCAATCGACGACGACGATCCTCCTTTGGATCAAGGCTTCTGCACCGATTTCCTCTACTCGCCGCCGACCGTTAACAACAGCAGCGCCATGCAAACCCTCACCCGTTCGTCTCAGCTCACAGAGCTCCGCCAGCCGCCTGTTCCGGCGACTCCTCGACCTCCGATTCCACCGCCGAGGAGGCCGGAACCGAAGACGCCTAACTTCGCGTACTTCTCGAGGCACAATACGAGAGCGGAGCCGAGCCCGAAGACCGCCGCGAGGGAATCCACGGTGGTGGATTCGTGCGACACGCCTGGCGCGGCGGCGGCGGCGGCTTCGAGAGTTTCGGAGACTGTGAGGAGCGCGGCGGAGGGAGACGGCGGCGTGGCGGCGCCTTCGACGAGTGGCGGCGGTGGAAGGAGCACGATGATGTGCGATTTGACTATGACTTCATCGCCGGGCGGTTCGAATAGCAGCGGCGAGCCAGTTCAGGTGGCGGCGGCGGAGGACCGGAAGCGGAAGGGTCGGGAGGCGGAGGAATGGGAGTGTCAGAGCGAGGTGAGTGAATTGACTCAGCGTTGTTTCTTTCATTCTTTGTCTCTCACATCACATCACGGTTACCATTCCCTATTCGCTTGCGTTCGCTATCGTGCGCAGGCAAAGAAACAAGTTCATGGATCAACATCTACAAAGAGATCACGTGCTGCGGAGGTCCATAATCTCTCTGAGAGGAGGCGTCGTGATCGGATTAATGAAAAGATGAAAGCCCTGCAAGAACTTATACCTCGTTGTAACAAGTCAGACAAAGCTTCAATGCTGGATGAAGCAATTTCATACTTGAAATCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGGTACCTATGATGTTTCCTGGAATCCAGCAGTACATGCCAGCAATTGGAATGGGTATGGGTATGGAAATGGGAATGAACAGACCAGTAATGCCATTTCCCAATATGTTACCTGGTTCGTCTTTGCCAGCCACAACTGCAGGTGTTCATTTGGAACCAAGGTTTGCCATGCCTCCTTTCCACATGCCGCATGTTCCTGCACCCGATTCATCTAGAATGCAAGCAGAAAATCAGTCTGATAATAATATGGTCACCTCAGCTGGTCCACCTCATCCAAGTCAGTCACGTATCCCAAACTTCACTGATCCTTATCAACAATTTCTTGGTCCCCACCAGATGCAGTTTCAGTTAATTCAGAATCAAGCAATGAACCAACCAAATGTTAGCAAGCCAAGTACAACATCATTGAATGGATGTGTGAGTACCTTAAACACACTGATCCAAAAAGACCCTCTTATTCTGAGCAAAGTTTCGCTCTACCCCATCACTGAAACCCCACTACACATAGCCTCTTTGTTTGGACATTTGAACTTGTGTGAGGTTCTTGTTCAGAATAGTCCCAGTTTAGCCACCGAAGTGGACTCACAAGGACGTAGCCCTCTTCATTTGGCTTCAGCTAAAGGGCACACTGAGGTCGTGAAACTGCTGTTGAGGACAAACCCCGAAATGTGTTTGGTTGAAGACAAAGATGGAATGCTTCCTCTCCACTTTGCTGCAATGAGAGGGCGTGTGGGAGCCATTGAGGAGTTGATCAAAGCCAAGCCACAATCTATTCGAAAGATGGCCCACACTCATGATGGTTCTGTTCTGCACTTGTGCGTTCGATATAACCATCTCCACGCCTTGAAATTGTTGCTGGAATTACTGAAAAGTGACCATCAATTCCTATCACTGCAAGACCAACAGAACAACTCTCTTCTGCGTTTAGCAGTCAAACGCAGACAAATCAAGATCATAAAATACTTGCTTTCAGTACCGGAGATGAGTACAGAAATAAATAGTTTAAATAGGGAGGGTTTAACAGCGACGGAGATGTTGGAGCGGTGTGGAAGAGATTTGATGAGGCAAGACATAGGAATTGAAAATCCTGCAAGACTAGTCAGCGAGCAAGAAACGAGTCCGTCAACATCTATACAACAACAAGAGACATCCTCACAAAGGATGACTATGATAATTGTAGAGTCATCAGAAGCAGCCTCACAAAGCAATGGTCCTGTCCAGGCAGAAGGAGAGGATGGATGGAACAGGTTTGAGAGGTTCTGCAGAAGGTACCTGCTAGACCAAGGAAGTTGGATAGACAAAAATGCAAGGGAGAAGTTGATGGTTGCAGCCACTGTTATTGCAACCATGACTTTTCAGTCAGCGTTAAGCCCACCCGGCGGTGTATGGCAAGGCGATACAACGCAAGATGGGTTTACCTGCTCTGACTATGGTTTCTGTGAGGCGGGCACGGCGGTTGTTGGTTATGCTTGGTCACCGGATTTTCTAAAGTTCGTTTTTCTCAACTCTTCGTCTTTCTTTGCTTCTCTTTGTGTCATGCTCGTTCTCATGAGCGGCTTTCCGCTCGAGAACAAGGTTGTTGTCTGGATCTTGGCCGTTTTGATGATCGTTGCAGCTTCCTGCATGCTGCTCACCTATATGTGGGCCTTGGGCTTGGTTTGCCCAAATCATATTTATTATAGAATTCGTAAACTGGGCTATCTTTTGGTTGGTATTTGGGCTTTTTTACTTGCCCTTGTTATTTTGGTCCAAACCAGCCGAATAGTGTTCTGGTTTAGATCACGCTCCCGCCGCAACTCCCAACAATAG 3003 0.4958 MTNQNHRVPDFDIQMDDDREYPILTPSGLPRQKKPSIADDDDIMELLWQNGQVVMHSQNHRSLRKPPLPRNSDDASPAGPSTAREIRPQVENYNQYLFMQEGEMASWLHYPIDDDDPPLDQGFCTDFLYSPPTVNNSSAMQTLTRSSQLTELRQPPVPATPRPPIPPPRRPEPKTPNFAYFSRHNTRAEPSPKTAARESTVVDSCDTPGAAAAAASRVSETVRSAAEGDGGVAAPSTSGGGGRSTMMCDLTMTSSPGGSNSSGEPVQVAAAEDRKRKGREAEEWECQSEVSELTQRCFFHSLSLTSHHGYHSLFACVRYRAQAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPAIGMGMGMEMGMNRPVMPFPNMLPGSSLPATTAGVHLEPRFAMPPFHMPHVPAPDSSRMQAENQSDNNMVTSAGPPHPSQSRIPNFTDPYQQFLGPHQMQFQLIQNQAMNQPNVSKPSTTSLNGCVSTLNTLIQKDPLILSKVSLYPITETPLHIASLFGHLNLCEVLVQNSPSLATEVDSQGRSPLHLASAKGHTEVVKLLLRTNPEMCLVEDKDGMLPLHFAAMRGRVGAIEELIKAKPQSIRKMAHTHDGSVLHLCVRYNHLHALKLLLELLKSDHQFLSLQDQQNNSLLRLAVKRRQIKIIKYLLSVPEMSTEINSLNREGLTATEMLERCGRDLMRQDIGIENPARLVSEQETSPSTSIQQQETSSQRMTMIIVESSEAASQSNGPVQAEGEDGWNRFERFCRRYLLDQGSWIDKNAREKLMVAATVIATMTFQSALSPPGGVWQGDTTQDGFTCSDYGFCEAGTAVVGYAWSPDFLKFVFLNSSSFFASLCVMLVLMSGFPLENKVVVWILAVLMIVAASCMLLTYMWALGLVCPNHIYYRIRKLGYLLVGIWAFLLALVILVQTSRIVFWFRSRSRRNSQQ 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 215 276 - -
Mupr13058g00001 1000 Coils Coil 343 363 - -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 156 174 - -
Mupr13058g00001 1000 ProSiteProfiles Ankyrin repeat profile. 594 626 IPR002110 GO:0005515
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 764 784 - -
Mupr13058g00001 1000 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 335 403 IPR036638 GO:0046983
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 763 784 - -
Mupr13058g00001 1000 Pfam Ankyrin repeats (3 copies) 565 650 IPR002110 GO:0005515
Mupr13058g00001 1000 FunFam Basic helix-loop-helix transcription factor 332 395 - -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 238 266 - -
Mupr13058g00001 1000 Pfam Domain of unknown function 832 948 IPR026961 -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 1 37 - -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 327 346 - -
Mupr13058g00001 1000 Gene3D - 621 757 IPR036770 -
Mupr13058g00001 1000 Gene3D - 512 620 IPR036770 -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 179 201 - -
Mupr13058g00001 1000 Gene3D - 332 395 IPR036638 GO:0046983
Mupr13058g00001 1000 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Mupr13058g00001 1000 SUPERFAMILY Ankyrin repeat 536 748 IPR036770 -
Mupr13058g00001 1000 Pfam Helix-loop-helix DNA-binding domain 341 387 IPR011598 GO:0046983
Mupr13058g00001 1000 ProSiteProfiles Ankyrin repeat region circular profile. 594 621 - -
Mupr13058g00001 1000 CDD bHLH_AtPIF_like 337 400 IPR047265 -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 463 491 - -
Mupr13058g00001 1000 SMART ANK_2a 700 732 IPR002110 GO:0005515
Mupr13058g00001 1000 SMART ANK_2a 663 692 IPR002110 GO:0005515
Mupr13058g00001 1000 SMART ANK_2a 628 658 IPR002110 GO:0005515
Mupr13058g00001 1000 SMART ANK_2a 560 589 IPR002110 GO:0005515
Mupr13058g00001 1000 SMART ANK_2a 594 623 IPR002110 GO:0005515
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 469 491 - -
Mupr13058g00001 1000 SMART finulus 343 392 IPR011598 GO:0046983
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 134 154 - -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 134 203 - -
Mupr13058g00001 1000 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 44 530 IPR031066 -
Mupr13058g00001 1000 MobiDBLite consensus disorder prediction 56 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13058g00001 Mupr-Chr13058 5076 18412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13058g00001 5 392 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 41.262 1.35e-64 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr13058g00001 PGG 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13058g00001 - - gmx:100797225 748.814