Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13040g00003 ATGCTGGAAATCTCAACTTCACCGGAGACCCCCGTAGAGAACCCGGAGGGCGGCGCCGTGGCGGTCTTAGATGGTTCGAAAGGGGAGCACGGCGAAGAGGGTGACCGGAATTCCGCCGCGAACCGGTGGCCTCGGGAAGAGACAATGGCTTTGCTGAAGATAAGGTCTGAAATGGACGTTGCTTTCAAGGATACAAACCCCAAAGCCCCTCTCTGGGAACAAGTTTCAAGGAAATTAGCGGTGCTAGGATATCATAGGAATGCGAAGAAGTGCAAGGAGAAATTCGAGAACATTTACAAGTACCATAGGAGGACGAAGGAAGGGCGTTGCGGCAAAGGCAAATCGAACGGTAGCAAGAATTATAGATTTTTCGAGCAATTGGAAGCTTTAGATGGTCAACAGGCAGTTGAGGCGGTTCCGTGTTCCGTTAGCGCACACGTGGCGGAGCATTCTAGTTCTACCACTTCGTGTTCGGGGTCTAAGAAGAGCAAACTGATGAGCAAGTTCTTGGAGGGGTTGATGAAGGAAGTGATAGAGAAGCAAGAGACGCTGCAGAGGAAGTTCATGGAAGTATTGGACAAGTGCGAACGCGATCGAATGGCCAGGGAGGAAGCCTGGAAGGAGGAGGAGCTCGCACGGATTCAGAAAGAACGCCAGCTTCTCGCTCAGGAACGCTCAATTGCCGCTGCCAAAGATGAAGCCGTGCTTGCTTTTCTCAGAAAGTTCGCAGAGGCAGAAGGCACTGTGCACTTGTTCGACAAATTTCATGTTCAAAACAACAAACACATGGACATGCAAGAAACTTCTAATGCTAATGTTATTGCTAATGAGAATGGTGATATTCCTGATATGGATAAGCAAGAATGTGGAAATGTTAGTGTTGGGAATTTGGTGCACATGAGTACTTCGCGCTGGCCTAAGGAAGAAGTGGAGGCTTTGATAAGGTTGAGGACGCAGCTTGATGTGCAGTCTCAAGGGAATGTTGGGTCTAAGGGGCCTCTTTGGGAGGAGATTTCTTCGGCCATGAAGAGCCTTGGTTACGATCGCAGTGCTAAGAGGTGTAAGGAAAAATGGGAGAACATAAACAAGTACTTCAAGAGGATGAAGGAGAAGAACAAGAGAAAGCCTCAGGATTCCAAGACGTGTCCCTATTATCACACCCTCGAAGCTTTGTACAGTAAAAGGCCTAAGAAGATGGATGAGTCTGGTGAGAATAATTCTGGGAACGAGTTGAAGCCTGAGGAGCTATTAATGCATATCATGGAGAGTCAAGAAGAGAGACAACAGCAACAGATAGAGACTCAGTCATCGTCTGAAGATGCAGATGCTGAGAGAGAGGACACCGATCAGAACCAGGGAGATAATCAAGATCAAACTGGGTATCAGATGGTTCATAATAGTCCTTCTATAGCAATCATGAGTTAG 1425 0.4772 MLEISTSPETPVENPEGGAVAVLDGSKGEHGEEGDRNSAANRWPREETMALLKIRSEMDVAFKDTNPKAPLWEQVSRKLAVLGYHRNAKKCKEKFENIYKYHRRTKEGRCGKGKSNGSKNYRFFEQLEALDGQQAVEAVPCSVSAHVAEHSSSTTSCSGSKKSKLMSKFLEGLMKEVIEKQETLQRKFMEVLDKCERDRMAREEAWKEEELARIQKERQLLAQERSIAAAKDEAVLAFLRKFAEAEGTVHLFDKFHVQNNKHMDMQETSNANVIANENGDIPDMDKQECGNVSVGNLVHMSTSRWPKEEVEALIRLRTQLDVQSQGNVGSKGPLWEEISSAMKSLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPQDSKTCPYYHTLEALYSKRPKKMDESGENNSGNELKPEELLMHIMESQEERQQQQIETQSSSEDADAEREDTDQNQGDNQDQTGYQMVHNSPSIAIMS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 393 408 - -
Mupr13040g00003 474 CDD GT1 303 369 - -
Mupr13040g00003 474 SUPERFAMILY Homeodomain-like 302 390 IPR009057 -
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 423 437 - -
Mupr13040g00003 474 Pfam Myb/SANT-like DNA-binding domain 41 130 IPR044822 -
Mupr13040g00003 474 Pfam Myb/SANT-like DNA-binding domain 303 391 IPR044822 -
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 419 474 - -
Mupr13040g00003 474 FunFam Trihelix transcription factor GT-2 305 367 - -
Mupr13040g00003 474 CDD GT1 41 106 - -
Mupr13040g00003 474 ProSiteProfiles Myb-like domain profile. 303 362 IPR001005 -
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 1 44 - -
Mupr13040g00003 474 SMART sant 301 364 IPR001005 -
Mupr13040g00003 474 SMART sant 39 101 IPR001005 -
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 453 474 - -
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 26 44 - -
Mupr13040g00003 474 Gene3D - 305 367 - -
Mupr13040g00003 474 Gene3D - 43 104 - -
Mupr13040g00003 474 MobiDBLite consensus disorder prediction 393 412 - -
Mupr13040g00003 474 PANTHER FI21293P1 21 456 - -
Mupr13040g00003 474 ProSiteProfiles Myb-like domain profile. 35 99 IPR001005 -
Mupr13040g00003 474 FunFam Trihelix transcription factor GT-2 43 104 - -
Mupr13040g00003 474 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13040g00003 Mupr-Chr13040 27976 29617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13040g00003 169 397 Trihelix Transcription Factor Family AT1G76880 46.939 4.31e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr13040g00003 Myb_DNA-bind_4 2.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13040g00003 - - gmx:100787329 671.389