Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13038g00001 ATGGCGACGTACTTTCATGGTAGCACTTCAGAAATCCCATCCTCCGCTGAAGGGTTGCAGACTCTTTACCTTATGAACCCAAACTACGTACCGTACTCTGACGCGGCGCAACACCCAACGCAAAACATGCTCCTCGTCAATCCCAACACTGGTGACACTAGTCCCACTCCCGCCAACGCGCTCAACCTTGCCAACTTCTCCCACGCGCCGCCGCCTCCGTCTCCGAACAACCACCGTCAACAACACCTAATTGGGCTTACCACTCCCTCGTCAAACATCCTCGGATCCGCCGTCGTGGACCCCGCTCGTCCGTCGTCGTTCCTTGGACAACATGAATTCTCCGGCTTTCACGGTGCTGCCGTCGTGACAACGGCGGCAGCAACAGCCTCTCGTGCTCAGTATAACTTATGGGGTTCCATATTTGATCAATCTGCGTCGAATATGACACCAGCAACCACGAACGTCCCACCTAATAGTATAGGAAGTGTTTCTGGTAGTGTCACTCCATCGACGCAGATTGGTTTTCATAGGCCTAATGATTTGTTGCTAAGCCTTTCTTCACAACAAACACCCTACAGGTCTCTCTCCGGGGATTTTCAGGCTATATCTCCGGCGAGTCGCGGCGGCGGCGACGATATGCGGGGGGTTTCAAGCATGCATAGTGTTGTTTTGGGTTCCAAGTATTTGAAAGCCACGCAGGAGCTTCTTGATGAGGTTGTGAATGTGGGTAAGGGAATCTACAAAGGGGAAGAATCTATGGAGGGGGCTAAGAAAGAGAAGATGAAAGGGAATATTGAATCCACTTCTGGGGTTGTTGATGGTGGAGAGAATAATAATGGAAGCAAACAAGGAGGTGAACTCAGCACGGCACAGAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTCGTGAACATGCTCGAAGAGGTGGAGCAAAGGTACCGACAATATCACCACCAAATGCAAGTTGTTATAACATCGTTCGAGCAGATAGCGGGCATTGGTGCAGCGAAGTCTTACACAGCCCTTGCCTTAAGGACAATCTCAAAGCAATTCCGGTGCCTCAAAGATGCAATCTCTTCACAAATAAAGTCAACGAGCAAGACCTTGGGTGAAGATGATTGCTTGGGAGTTAAGGTAGAAGGTTCGAGGCTTAGGTATGTTGACCATCAACTCCGACAACAACGTGCGTTGCAGCAGCTAGGAATGGTCCAACACAATGCTTGGAGGCCCCAAAGAGGCTTGCCTGAACGCGCTGTTTCCGTTCTTCGTGCTTGGCTTTTTGAGCATTTCCTGCACCCCTATCCTAAGGACTCTGATAAGGTTATGCTTGCAAAACAAACTGGACTTACTCGGAGCCAGGTGTCTAACTGGTTTATAAATGCCCGAGTTCGTCTATGGAAGCCAATGGTTGAAGAAATGTACTTGGAAGAGGTAAAACAAGAGCCGAATAATAATGGCTCCCAGGAGAAGAACACAAACAGACCAAAAGAGTCGAGCAAGGAGTTATGGTCAGAAGCAAATGCTGCAGAAGAATCAGGCGCCATGAGACTTGATCAGATTAATGTTCTCCAAGCAAAGGCAGAAAGCTTCAACAACCAAACCACTTCCCCAACAGAGATCTCCAATTCTAATTCACTCTCAACATCTCCAATGGGAGAAGGAGGAGGGTCCCTCCAAGGTAGCTTCCTTTCAGTGGACATGGAAATGAAGCTTCATGGAGAGACAAGAGAAGGAAACACAAAGTTTGGCAATATTGAAAACCATGGTGGTGGGGGTTTTGGAGCATTTGCAATGGAAGACATTGGAAGGTTTCATCATGTCAATGAGCAACTGGCTCCAAGGTTTCATGGAAATGGTGTTTCCCTCACTCTGGGACTTCCACACAGTGATAATAATGTTACTCTCTCCGGAACCCAACATGGATTCCTCTCGCAGAATGTGCACTTGGGAATGAGAAACAACCAAAATGAGTTTTGTGGCGCCATCAACACTCCACCTTCTTCTCATTCAGGCACTAGTTATGAGAGCATTGACATTCAAAACCGAAAGAGGTTTGCTGCGCAGTTGTTGCGGGATTTCGTGGCCTAA 2088 0.4832 MATYFHGSTSEIPSSAEGLQTLYLMNPNYVPYSDAAQHPTQNMLLVNPNTGDTSPTPANALNLANFSHAPPPPSPNNHRQQHLIGLTTPSSNILGSAVVDPARPSSFLGQHEFSGFHGAAVVTTAAATASRAQYNLWGSIFDQSASNMTPATTNVPPNSIGSVSGSVTPSTQIGFHRPNDLLLSLSSQQTPYRSLSGDFQAISPASRGGGDDMRGVSSMHSVVLGSKYLKATQELLDEVVNVGKGIYKGEESMEGAKKEKMKGNIESTSGVVDGGENNNGSKQGGELSTAQRQELQMKKSKLVNMLEEVEQRYRQYHHQMQVVITSFEQIAGIGAAKSYTALALRTISKQFRCLKDAISSQIKSTSKTLGEDDCLGVKVEGSRLRYVDHQLRQQRALQQLGMVQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKQEPNNNGSQEKNTNRPKESSKELWSEANAAEESGAMRLDQINVLQAKAESFNNQTTSPTEISNSNSLSTSPMGEGGGSLQGSFLSVDMEMKLHGETREGNTKFGNIENHGGGGFGAFAMEDIGRFHHVNEQLAPRFHGNGVSLTLGLPHSDNNVTLSGTQHGFLSQNVHLGMRNNQNEFCGAINTPPSSHSGTSYESIDIQNRKRFAAQLLRDFVA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13038g00001 695 MobiDBLite consensus disorder prediction 478 506 - -
Mupr13038g00001 695 Pfam Associated with HOX 222 359 IPR006563 -
Mupr13038g00001 695 MobiDBLite consensus disorder prediction 529 554 - -
Mupr13038g00001 695 Gene3D - 411 491 - -
Mupr13038g00001 695 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 491 - -
Mupr13038g00001 695 ProSiteProfiles 'Homeobox' domain profile. 405 468 IPR001356 GO:0003677
Mupr13038g00001 695 SUPERFAMILY Homeodomain-like 409 474 IPR009057 -
Mupr13038g00001 695 MobiDBLite consensus disorder prediction 270 290 - -
Mupr13038g00001 695 SMART HOX_1 408 472 IPR001356 GO:0003677
Mupr13038g00001 695 Pfam Homeobox KN domain 425 464 IPR008422 GO:0003677|GO:0006355
Mupr13038g00001 695 SMART prehox3 217 360 IPR006563 -
Mupr13038g00001 695 FunFam BEL1-like homeodomain protein 9 411 473 - -
Mupr13038g00001 695 Coils Coil 292 319 - -
Mupr13038g00001 695 CDD homeodomain 408 469 IPR001356 GO:0003677
Mupr13038g00001 695 MobiDBLite consensus disorder prediction 268 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13038g00001 Mupr-Chr13038 19649 23342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13038g00001 1 695 Homeobox Transcription Factor Family AT2G35940 42.493 2.25e-133 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr13038g00001 POX 1.7e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13038g00001 - - gmx:100786883 1045.03