Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13033g00001 CAACAAAGGAACTCATCAAATGAAACTACTGGGTTTGTGTTTAAAAATTGTAACTTCACTGGGACAGGAGGAAAGGCTATACTAGGAAGATCATTAAGGGATTATTCCAGAGTCATCGTAGCCAACTCATTCCTATCAGATGTCGTTAGACCTGAGGGTTGGAATGCTCTTTATCCTAACCAAGAGGCAACTGTCACATATGTGGAGGAGGGAAATACAGGACCAGGGGCAAATCAGTCCCAACGTGTGAAATATGTGAAGCACTTAAGTGGATTTGCACTTGATCAATTCTTAAATATCTCTTTTATTGATACAGAAGGGTGGATTGGACAATTGCCAACAAAGATCTTCGTT 354 0.404 QQRNSSNETTGFVFKNCNFTGTGGKAILGRSLRDYSRVIVANSFLSDVVRPEGWNALYPNQEATVTYVEEGNTGPGANQSQRVKYVKHLSGFALDQFLNISFIDTEGWIGQLPTKIFV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13033g00001 118 Gene3D - 1 117 IPR012334 -
Mupr13033g00001 118 Pfam Pectinesterase 1 87 IPR000070 GO:0030599|GO:0042545
Mupr13033g00001 118 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 109 - -
Mupr13033g00001 118 SUPERFAMILY Pectin lyase-like 1 114 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13033g00001 Mupr-Chr13033 18 954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13033g00001 3 109 Carbohydrate Esterase AT1G05310 42.593 1.04e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13033g00001 - - cam:101494460 158.303