Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13026g00003 ATGACTTCAGCTAATTACGACGAGGATGACTACCAAATTTTCAACTTTGATGAGACAATTCTTTCACCTAACATAGATGAGTTTTTAGAAGATCCACTTTGTGTCCCAAGGGACGCATTGGAAAGTTTGGAACGGATCAATTTTTGGGAGGACAAAGATTCAAATTCAATTGTCATGTTTTCTAACACTTCAGAGAAGGAAAAGGTCAAATTGGAACGATCAGAAAAGGTCAAATTGGAACGATTAGAAAAGGAAAAACCTGAGAAGAAATCATTCACCAATGCGTCAACTATCCAAAATAATCATGGGTGTACGAGGGAGCCGAAAAACTTGTCAAATATAACTAAGAAGTCTAGAAGTAAAATCTTGAGAGCAACGTGTATATCTTCTCGATCATCCTCCAAGTGGAAAATTGATTTTCAGAATTCAAAGCAGAATTCGAGTATTGCTAAGTTCTGCCATAGAAGATGTAGCCACTGTGACGTGAGTACAACTCCTCAATGGAGAGCTGGTCCTTTGGGGCGAAATACCTTATGTAATGCTTGTGGTATGCGATACAAGTCAGGGAGGTTATTTCCAGAGTATAGACCAGCCAAAAGTCCAACTTTTGATGACAGCAAGCATTCAAATTTTCACAGGAAGATAATAAGAATGAGAGCATAA 663 0.3816 MTSANYDEDDYQIFNFDETILSPNIDEFLEDPLCVPRDALESLERINFWEDKDSNSIVMFSNTSEKEKVKLERSEKVKLERLEKEKPEKKSFTNASTIQNNHGCTREPKNLSNITKKSRSKILRATCISSRSSSKWKIDFQNSKQNSSIAKFCHRRCSHCDVSTTPQWRAGPLGRNTLCNACGMRYKSGRLFPEYRPAKSPTFDDSKHSNFHRKIIRMRA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13026g00003 220 PANTHER GATA TRANSCRIPTION FACTOR 121 219 - -
Mupr13026g00003 220 FunFam GATA transcription factor 152 201 - -
Mupr13026g00003 220 MobiDBLite consensus disorder prediction 92 110 - -
Mupr13026g00003 220 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 153 212 - -
Mupr13026g00003 220 ProSitePatterns GATA-type zinc finger domain. 157 182 IPR000679 GO:0006355|GO:0043565
Mupr13026g00003 220 CDD ZnF_GATA 156 207 IPR000679 GO:0006355|GO:0043565
Mupr13026g00003 220 Gene3D - 151 215 IPR013088 GO:0006355|GO:0008270
Mupr13026g00003 220 ProSiteProfiles GATA-type zinc finger domain profile. 155 187 IPR000679 GO:0006355|GO:0043565
Mupr13026g00003 220 Pfam GATA zinc finger 157 190 IPR000679 GO:0006355|GO:0043565
Mupr13026g00003 220 Pfam Cell division control protein 24, OB domain 3 56 186 IPR035203 -
Mupr13026g00003 220 MobiDBLite consensus disorder prediction 83 110 - -
Mupr13026g00003 220 SMART GATA_3 151 201 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13026g00003 Mupr-Chr13026 15562 16224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13026g00003 154 219 C2C2-Gata Transcription Factor Family AT5G66320 72.727 2.64e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr13026g00003 GATA 7.5e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13026g00003 - - ccaj:109790639 184.496