Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13019g00004 ATGGGTGTGGACTATTATAAACTTCTTCAGGTAGATCGAAATGCCAACGATGATGAACTCAAGAAAGCTTATCGCAGGCTTGCTATGAAGTGGCACCCTGATAAGAACCCTAACAACAAAAAGGACGCTGAAGCCAAATTCAAGCAAATCTCAGAAGCCTATGATGTTTTGAGTGATCCACAAAAGAGGGCAGTGTATGATCAGTATGGTGAGGAGGGATTGAAAGGGCAGGTGCCACCCCCGGGTGCTGGTGGATTTGCTGGTGGCAGCGATGGCGGGCCGACAATGTTCCGGTTCAATCCGAGAAGTGCAGATGATATATTCTCGGAGTTTTTTGGGTTTTCAAGTCCCTTTGGTATGGGGGAGATGGGTGGCCGTGGTGCTGGCCCATCTGGCTTTCCCAGATTTGGGGATGACATTTTTGCTTCTTTTAGGAGTGGGGCTGGAGAAGCCTCTGGCAATGTGCCAAGGAAAAGTGCACCAATTGAGAGAACATTGCAATGCAGTTTGGAGGATTTGTACAAAGGGACTACCAAAAAAATGAAGATTTCCAGGGATGTGATTGATGCCAGTGGGAAGTCCACCACTGTAGAGGAAATTCTAACCATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATTACTTTTCCAGAGAAGGGAAATGAACAAAGAGGAGTTATACCAGCTGACCTTGTTTTTATTGTTGATGAGAAGCCTCATGGTGTCTTCAAAAGGGATGGCAATGATCTTGTTGTCACCCAGAAGATATCTCTCGTTGAAGCTCTGACAGGTTACACGGCGCAACTGACAACAATCGATGGGAGGAATCTTACAGTCACCACCAACTCCATCATTAGTCCAACATACGAAGAAGTTATTAAAGGAGAGGGTATGCCCATTCCCAAGGAACCTTCCAAAAGGGGAAACTTGAGAATCAAGTTCAACATCAAGTTTCCCTCTAGACTTACATCGGAGCAGAAAACCGGCATTAAACGATTACTGACATCTTCATAA 1017 0.4523 MGVDYYKLLQVDRNANDDELKKAYRRLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFAGGSDGGPTMFRFNPRSADDIFSEFFGFSSPFGMGEMGGRGAGPSGFPRFGDDIFASFRSGAGEASGNVPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVIDASGKSTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIVDEKPHGVFKRDGNDLVVTQKISLVEALTGYTAQLTTIDGRNLTVTTNSIISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSRLTSEQKTGIKRLLTSS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13019g00004 338 SMART dnaj_3 3 62 IPR001623 -
Mupr13019g00004 338 Gene3D - 161 239 - -
Mupr13019g00004 338 Gene3D - 241 321 - -
Mupr13019g00004 338 FunFam DnaJ subfamily B member 13 241 321 - -
Mupr13019g00004 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Mupr13019g00004 338 CDD DnaJ 4 59 IPR001623 -
Mupr13019g00004 338 Gene3D DnaJ domain 3 123 IPR036869 -
Mupr13019g00004 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mupr13019g00004 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mupr13019g00004 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mupr13019g00004 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mupr13019g00004 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 162 241 IPR008971 GO:0006457|GO:0051082
Mupr13019g00004 338 Pfam DnaJ C terminal domain 162 320 IPR002939 -
Mupr13019g00004 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 329 IPR008971 GO:0006457|GO:0051082
Mupr13019g00004 338 Pfam DnaJ domain 4 67 IPR001623 -
Mupr13019g00004 338 CDD DnaJ_C 160 323 - -
Mupr13019g00004 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Mupr13019g00004 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mupr13019g00004 338 SUPERFAMILY Chaperone J-domain 3 120 IPR036869 -
Mupr13019g00004 338 FunFam DnaJ subfamily B member 13 3 123 - -
Mupr13019g00004 338 FunFam Dnaj homolog subfamily b member 158 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13019g00004 Mupr-Chr13019 30914 34740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13019g00004 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 4.42e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13019g00004 K09510 - gmx:100777607 593.578