Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13008g00002 ATGGAGGAAGACCAAGAGGCTCAGCATAACAGGGAAAATCAAGGGTCTCTGGCTACTGGGGAAGGAGAAGGATCAGAGGGTAATGGAGCAGGAGAAGGAGAAAATCTTAACAACAATGAGCATCATTCTTGCATGTGTCATATCTGCAACAAAGGCTTCAGATCAGGTAAGGCTCTTGGTGGACACATGAGAATACACAACCTCTCTAGGAAGCAAGTTCACAAGGCCAAACAAGGCACTAGTGTTGCAAAACCCAAAACCAAAAAATGGGAGTTGGTGAGTGGCAGCCCCACTTGTTCCCTTTGTGGGAAGAGCTTCTCTTCCATGAAGTCCTTGTTTGGGCACATGAGGTCTCACCCTGAGAGGGTGAGGAGGGGAATTCAGAATATCACCCCTAACAAGAATGGTGCATTCTCCAATTCCACATCTTCCTCGACCCTCTCTGATGATTCTGCCGTTGATCTCTCTCAAGCTCTCAGGGGTTGGTCTGTGACTGCCAAGAGAGGTCGCAAAAGCCCCTCTTGTAGCAATGCAAATTCTGGTTTAGAAGATGATGGAATTGAGGAGCGTATGCAAGAGGCTGTGTATGAACTCATGTTGCTGGCGAGTGGGAACCCCAAGTGGGAGGATGGTGATCAGATTGAAGAGAAGCCATTGAACAAGATGGGGTGTGAAGATGATTTGTTGAAGCCAGTTTTTGTGAATTCTGATGACATGAAGAACAAGAACAGAAGTAAAAGGAAGAAAGGGACAAAGAAAGTGAAATTAACAGAGTTAGAAACGGCTGAGGAGGAGGGGAACAAGTTGGTTAGATGCAGACTATGCAATTCGTCTTTCCCATGCCACCAAGCTTTGGAGGGTCATCTATGCAGCCATAAAAATTCTAAGAACATTCAGGTTATGGATGAATCTGAATCAGATCATGTGTTAGTCACAAAAGAGGAGCATCATGCCAAAGGAGCAACCATGCAAGGGGATGAAACAGGAATTGTTCTTGGGGGTAGTGCTGTGGAAGCCATCAGAGGGCATCAGTGTAAAATTTTCGACAAGAATTTCTCAACTGGTCAAGTCTTTGGGGACCACAAGAGATCTAATTGGACCAGCAGGGCAGATGCTCAGTCAGCTCAAGCAACTTCATCTGTGGAAAATGGTCAGAATTTTTCCAAGATTTTGAGTTTTGATCTTAATCTGCCTCCTGCTATGGATGAGGAAGAGGGTGTTCAATCAGATTTGTTTATTCCTGCCAATATTATGATATCATCCAGTTATAATAAGTACCGTGTTTTGTTCAGAGTTGAAACTGACATTGCGCTCTCTGCACAAACAATATCACGGGGTCAGTAA 1344 0.4464 MEEDQEAQHNRENQGSLATGEGEGSEGNGAGEGENLNNNEHHSCMCHICNKGFRSGKALGGHMRIHNLSRKQVHKAKQGTSVAKPKTKKWELVSGSPTCSLCGKSFSSMKSLFGHMRSHPERVRRGIQNITPNKNGAFSNSTSSSTLSDDSAVDLSQALRGWSVTAKRGRKSPSCSNANSGLEDDGIEERMQEAVYELMLLASGNPKWEDGDQIEEKPLNKMGCEDDLLKPVFVNSDDMKNKNRSKRKKGTKKVKLTELETAEEEGNKLVRCRLCNSSFPCHQALEGHLCSHKNSKNIQVMDESESDHVLVTKEEHHAKGATMQGDETGIVLGGSAVEAIRGHQCKIFDKNFSTGQVFGDHKRSNWTSRADAQSAQATSSVENGQNFSKILSFDLNLPPAMDEEEGVQSDLFIPANIMISSSYNKYRVLFRVETDIALSAQTISRGQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13008g00002 447 MobiDBLite consensus disorder prediction 130 149 - -
Mupr13008g00002 447 ProSitePatterns Zinc finger C2H2 type domain signature. 44 66 IPR013087 -
Mupr13008g00002 447 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 119 IPR013087 -
Mupr13008g00002 447 Pfam C2H2-type zinc finger 99 121 - -
Mupr13008g00002 447 Pfam C2H2-type zinc finger 46 66 - -
Mupr13008g00002 447 ProSiteProfiles Zinc finger C2H2 type domain profile. 270 297 IPR013087 -
Mupr13008g00002 447 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 71 IPR013087 -
Mupr13008g00002 447 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Mupr13008g00002 447 SMART c2h2final6 270 292 IPR013087 -
Mupr13008g00002 447 SMART c2h2final6 97 119 IPR013087 -
Mupr13008g00002 447 SMART c2h2final6 44 66 IPR013087 -
Mupr13008g00002 447 MobiDBLite consensus disorder prediction 166 186 - -
Mupr13008g00002 447 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 215 404 IPR044653 GO:0003700
Mupr13008g00002 447 Gene3D Classic Zinc Finger 21 123 - -
Mupr13008g00002 447 SUPERFAMILY beta-beta-alpha zinc fingers 98 292 IPR036236 -
Mupr13008g00002 447 MobiDBLite consensus disorder prediction 1 35 - -
Mupr13008g00002 447 ProSitePatterns Zinc finger C2H2 type domain signature. 272 292 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13008g00002 45 139 C2H2 Transcription Factor Family AT2G26940 40.179 2.77e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr13008g00002 zf-C2H2_6 9e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13008g00002 - - gmx:102667003 526.168