Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1298g00006 ATGGCGAGTCGGCTGAAGGAAGACGAGAAGAACGAGCGCGTGATTCGAGGACTTCTCAAGCTTCAACATAATCGCAGATGCATTAACTGCAACAGTCTGGGACCACAATATGTGTGTACAAATTTCTGGACGTTTGTTTGCATAAACTGCAGTGGAATACACCGGGAATTCACTCATAGAGTAAAATCAGTTTCAATGGCCAAGTTTACTTCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGTCATTCTTTCCCTGATAGCAGCATAGTTGGTGCCAGTAATGTTGACAGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTAGTGAGAAGACCAATGAAAAACCACCAAGAGTCAAGGCAGGTGACAAAGATGATTTCTATCAAGGAGGATCTAAAAGCCCTCCCTATGAGGACGCATATGAACGTCGTTATAGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAGAAGTCCTGGTCGTCCTCCAATACTTAATGATTGGCGTCGTGAAGATCGTAGAATATCAGATGGAGATTATAAGGTGGAAAGCCAATCTCCTGAGCGAGCCAAAGATGCGGATTCTTCAAGCCCACCTGTAGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTAGTACCTCTTCGGATAAGTGAACCACCCAAACCGAACAGTGGAAGACCTGCTGATAGCTCAGCACTGACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCTGGCAACGAAAACCCAGTAGATGTTAAGCTTGAGACTACTAAGAGCTTAATTGATTTTGATGATGATCCTGAACTTCCAGTAGCTCCATCAATTCCTCCAGCCCAACAAACTACTGTGCCTCAACCTGTTGTGCAGCCAGCAAATTCCAGTAATGACAATTGGGCCTCTTTTGATGTTGCTCCTGGGGCAAAATCAACTCCAAGCCCCTCAAATTTAAGTCCACTCGAATCGGTGTTGTCCCAACTGTCTATGCCAGCGTCTTTACCTGCTCAAGTTTCTGGAGTCCAAGGATCTATTCCAGCATCATCTCTTACTTCTACTTCTGGAGCTGCAAGTGTTAGCGGTTTCTCAGCTTTCCCACCCAGCAATGCTTCAGTACCATCTCCTGGATTGACATCAGTATTGCCTCTTAATAATGCAGGACAGTGGGCCAGTTTGCAGCAGCAGCAAACATTGTTCCCTGCTGCTGTTAGTCAGTCTACTACACAACAATTTACACCACCATTAGGTGGAGCAGCAAATAATCAGCTATGGAATGTACATTCTGTACCCACAGTGCAAGGGCATCCAAGCACACCAATGCCACATCATGCCTCAAAGCCTGCCAATGAGGCTACATCCAGTGTTCTTTCACAACCTCCTGTTCTGGAAGTAGCAAGTGGAAGGAAAGAACTTCCTGCGTTGTGGTTAATGCAGGATCTGTTCACTGTAAAATATCCTTCCTTCCCTGCTCCAGTTCGAGGTTGGCAAATGGGTGTTCCCCATGGCATGGGTATCTCAATGCAATACAATAATGTGGTGCCCGTGCCAAGTTTTCCACAGTCATCAAAGTCAACAAATCCGTTTGATGTCAGCAGTGAACCAACCCCAAATCAAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCCTTGCCTAGTGTACCACCTGCAGGTGCAGTGCACCCTTCAGGCATGGGTTATCCAACACATGCCTGGACTCCACCCCCGCCATCATCATTTCTACCAGTTCTGCCCACACAAGCACAAATTCATGCATCTGCATTGGGACCAAGGGCATACATGGGGCAACAAATGCCAACTAACATGCCAATGGCAATGCCAAGGCAAGAAGTTGGGTATTTTGGTAATCAGGGAGCTGTTTTCGGCTTGTCAAGTCAAGATCAGCAGCTGGCCGTCGGGATTGTGGGGGCGCAAAGTGGAACGCAATCCAGAATCGCGTCTGTTGCAGCCGCCACTGGTAAAACGATTGGTCACTTTGCTAGGCAATATGAGATTAACTACAATGGGCCAGAGGCGCAGAAACAAAACTACACAACTGCTCTGGTAGAGAGAAGGGTCGAAGACCCCCCATAA 2196 0.4627 MASRLKEDEKNERVIRGLLKLQHNRRCINCNSLGPQYVCTNFWTFVCINCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKEIYFKEWDAQRHSFPDSSIVGASNVDRLRDFIKHVYVDRRFTSEKTNEKPPRVKAGDKDDFYQGGSKSPPYEDAYERRYSDRSSPGGRSPGYDQESRQYGDYKRSPGRPPILNDWRREDRRISDGDYKVESQSPERAKDADSSSPPVVRPVRDILGENVVPLRISEPPKPNSGRPADSSALTQRTASSSSLASGNENPVDVKLETTKSLIDFDDDPELPVAPSIPPAQQTTVPQPVVQPANSSNDNWASFDVAPGAKSTPSPSNLSPLESVLSQLSMPASLPAQVSGVQGSIPASSLTSTSGAASVSGFSAFPPSNASVPSPGLTSVLPLNNAGQWASLQQQQTLFPAAVSQSTTQQFTPPLGGAANNQLWNVHSVPTVQGHPSTPMPHHASKPANEATSSVLSQPPVLEVASGRKELPALWLMQDLFTVKYPSFPAPVRGWQMGVPHGMGISMQYNNVVPVPSFPQSSKSTNPFDVSSEPTPNQAPTFPSMSSLQGALPSVPPAGAVHPSGMGYPTHAWTPPPPSSFLPVLPTQAQIHASALGPRAYMGQQMPTNMPMAMPRQEVGYFGNQGAVFGLSSQDQQLAVGIVGAQSGTQSRIASVAAATGKTIGHFARQYEINYNGPEAQKQNYTTALVERRVEDPP 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1298g00006 731 SMART arf_gap_3 12 135 IPR001164 GO:0005096
Mupr1298g00006 731 Pfam Putative GTPase activating protein for Arf 13 130 IPR001164 GO:0005096
Mupr1298g00006 731 CDD ArfGap_AGFG 12 129 - -
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 129 147 - -
Mupr1298g00006 731 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 135 IPR001164 GO:0005096
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 316 335 - -
Mupr1298g00006 731 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Mupr1298g00006 731 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Mupr1298g00006 731 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Mupr1298g00006 731 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 140 - -
Mupr1298g00006 731 SUPERFAMILY ArfGap/RecO-like zinc finger 11 129 IPR037278 -
Mupr1298g00006 731 PANTHER ARFGAP/RECO-RELATED 1 687 IPR044820 GO:0005096
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 261 288 - -
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 462 488 - -
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 196 223 - -
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 551 583 - -
Mupr1298g00006 731 Gene3D Arf GTPase activating protein 2 139 IPR038508 -
Mupr1298g00006 731 MobiDBLite consensus disorder prediction 129 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1298g00006 Mupr-Chr1298 51379 60237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1298g00006 12 89 C2H2 Transcription Factor Family AT4G05330 37.805 4.43e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1298g00006 - - gmx:102669541 1115.52