Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12984g00001 ATGCAAGGGTCATTCGCTTCCCTTACTTCCAAAAGTGGGAGCATCTCAATCTCACTGACCTCATCATCTTCATCCACCACCATATATAGTACTTCTACTTCATATTTCACATCTCAAATATGTGTTCACTTCTTCTGCTCAAAAATAGATATGGAATCTGAGAGGCCTAACACAAACACTATTGAGACCTACAAACAACAACAACAACTAGAAGAAGAAGAAGAATACGATCGAGAAGAAAACAATGAGATCCTCAAGAGAAGAATCTCCAACCACCCTCTCTATGGACTGCTTGTTGAAGCTCACTTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGAGAGAGAGCTGAAGATAGATCAGATGCAAGCAATGGAGAAACAAAACTTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCACTTGGGAAGCTTAAAGAAGCAATGGTGGAACCACAACAGAAGTCGATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACTAAGGCAACCTTGCCTGCACCACCTGACCCAGCAGCTACTACATCTTCTAGTGAGTGCAAATTCAGAAGAAAGCCTACAGTTTAA 621 0.4203 MQGSFASLTSKSGSISISLTSSSSSTTIYSTSTSYFTSQICVHFFCSKIDMESERPNTNTIETYKQQQQLEEEEEYDREENNEILKRRISNHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQAMEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLRELTKATLPAPPDPAATTSSSECKFRRKPTV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12984g00001 206 Coils Coil 111 131 - -
Mupr12984g00001 206 SMART KNOX2_2 129 180 IPR005541 GO:0003677|GO:0005634
Mupr12984g00001 206 SMART KNOX1_2 83 129 IPR005540 GO:0003677|GO:0005634
Mupr12984g00001 206 MobiDBLite consensus disorder prediction 182 206 - -
Mupr12984g00001 206 Pfam KNOX2 domain 137 179 IPR005541 GO:0003677|GO:0005634
Mupr12984g00001 206 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 52 181 - -
Mupr12984g00001 206 MobiDBLite consensus disorder prediction 188 206 - -
Mupr12984g00001 206 Pfam KNOX1 domain 85 109 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12984g00001 Mupr-Chr12984 23737 29003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12984g00001 83 183 Homeobox Transcription Factor Family AT4G08150 36.111 8.37e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12984g00001 - - gmx:100790124 246.128