Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1297g00004 ATGAACTGGCAGCATCTTTGCTTCAATCTTAAGCTCCTTTTTAAGTGTCATGCTTCTAACGTAAAGAGAGCTTCCAAAATGGGAAGACAACCTTGTTGTGATAAGATTGGTTTGAAGAGAGGTCCATGGACTATTGAGGAAGATCACAAGCTCATGAATTTCATCCTCAACAATGGCATCCATTGCTGGAGAACGGTTCCCAAACTAGCAGGTCTTCTAAGATGTGGAAAGAGCTGCAGACTCAGATGGATCAATTATCTGAGGCCAGACCTCAAGAGAGGTGGCTTCACAGAAATGGAAGAAGATCAAATGATACAACTACATTCATCTCTTGGTAACAGATGGTCTAAGATTGCTTCACATTTTCCTGGGAGAACAGACAATGAAATCAAGAACCATTGGAACACAAGAATCAAGAAAAGGCTGAAACTCCTTGGTCTGGACCCTGTGACCCACATGCCAATTGAGCAAAAGGAACAACACACTGATGAGGACACAAATAAAGCTAATCCACATTCTGTAGGGTCTGAAGAAAATGTGGAGATTAAATCCTTGGACGGTGATGGCACCAAAGAAATGACAAAAACAGAAGGGAAAAGAGAAGAAAACAAGGTGACTTGGGATGAAACCACTGAACTTTTAAACAATTTTGAAATGCTATGTTCACAGTTGGACTTGGGATCATGGATGAGCCAAGACACCAATACTAGTGCTACTTCTCTATGTAGTTCTTCTGTCTCTCTGGATGACACTAGCCACCTTTCCATGGATGAATCCTCTTGCATACAGGAAAACTACTTACAGCAATGGGTTGATAGTATGGATTCCATTCTCTCATGGGATGATTTCAATCCTCTTGATCAAGAAACTTTCTTCATGGAAAATAGGGAATAA 894 0.4083 MNWQHLCFNLKLLFKCHASNVKRASKMGRQPCCDKIGLKRGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQMIQLHSSLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKLLGLDPVTHMPIEQKEQHTDEDTNKANPHSVGSEENVEIKSLDGDGTKEMTKTEGKREENKVTWDETTELLNNFEMLCSQLDLGSWMSQDTNTSATSLCSSSVSLDDTSHLSMDESSCIQENYLQQWVDSMDSILSWDDFNPLDQETFFMENRE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1297g00004 297 MobiDBLite consensus disorder prediction 155 204 - -
Mupr1297g00004 297 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Mupr1297g00004 297 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Mupr1297g00004 297 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Mupr1297g00004 297 FunFam MYB transcription factor 37 93 - -
Mupr1297g00004 297 MobiDBLite consensus disorder prediction 179 204 - -
Mupr1297g00004 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 87 IPR017930 -
Mupr1297g00004 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Mupr1297g00004 297 SMART sant 92 140 IPR001005 -
Mupr1297g00004 297 SMART sant 39 89 IPR001005 -
Mupr1297g00004 297 CDD SANT 42 87 IPR001005 -
Mupr1297g00004 297 SUPERFAMILY Homeodomain-like 37 134 IPR009057 -
Mupr1297g00004 297 Gene3D - 95 173 - -
Mupr1297g00004 297 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Mupr1297g00004 297 Gene3D - 37 93 - -
Mupr1297g00004 297 CDD SANT 96 136 IPR001005 -
Mupr1297g00004 297 FunFam MYB transcription factor 94 155 - -
Mupr1297g00004 297 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 27 240 - -
Mupr1297g00004 297 MobiDBLite consensus disorder prediction 155 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1297g00004 Mupr-Chr1297 18973 20197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1297g00004 27 181 MYB Transcription Factor Family AT1G66230 67.097 9.72e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr1297g00004 Myb_DNA-binding 9.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1297g00004 K09422 - gmx:100783231 473.011